Gene Aboo_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0349 
Symbol 
ID8827291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp350921 
End bp352249 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content39% 
IMG OID 
Productseryl-tRNA synthetase 
Protein accessionYP_003482722 
Protein GI289596026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATA TCAAGCTTAT TCGAAAAAAT GGAGATATGA TAAGAGACAT GCTCAGAAAG 
AGGTTCAAAG ATGAGAAGAT AGTGGATGAG ATCCTACAGT ACGATAACCT GTGGAGAGAA
ACTTTGAAGG AAATCGAAAA ACTCAGGCAT GAGAGGAACA AGAAGAGCGT GGAAATTGGA
AAACTTGTAA AGGAGGGTAA GGATATAAAA GAGTTAAAGG ACGAGATGAA AGAGTTGAAC
AGAAGAATCA AGGAGCTTGA GGAGAATGTA GAAGAATACA AGAAAAGGAG AGATTACCTC
CTTATGCGCC TTCCAAATCT GCTGCTTGAT GACACTCCAG TATGCGAAGG TGAGGAAAAT
TCACCAGTAG TGCGAACATG GGGTAAGGCA AGAGTTATGG AAGATAATAT GGAGTATTTC
AAAAATTGCT CTGCAGGAAT GGATTATGAA ATCATAGAGA ATAAGCCAGA AAGCCATGTA
GATATAATCG AAAAATACGA TTTGGCTGAT ACTGCAAGGG CTGGAAAAAT TGCCGGAGCG
AGATTCTATT ATTTGAAAAA TGAATTAGTT ATTTTGGAGC AATCATTAAT AAGATTCGCA
TTAGACCATA TGGTATCCAA GGGTTATACT CCTGTAGCCC CTCCTTTAAT GATTCGCCGT
GCTGCAATGG AAGGTGTAAT AGATTTTGAG GCCTTTGAAG AGATGATTTA TAAAATTGAA
GGCGAGGATT TGTATATGAT CGCCACAGCC GAGCATCCGC TTGTGGCAAT GCATATGAAG
GAGATTTTAG ATCCAAACTC CCTGCCTTTA AAATATGTAG GTATTTCACC CTGTTTCCGT
AAGGAAGCAG GTGCTCACGG TAAGGATACA AAGGGCATAT TCCGAGTTCA CAATTTCTAC
AAGGTTGAGC AAGTTGTATT CTCAAAGCCA GAGGAATCTG CGATATTAAT GGAAGAACTG
ATAAAGAATG CAGAGGAAAT ACTGCAAAAA TTAGAGTTGC CGTATAGGGT GATTAATATA
TGTAGCGGAG AGCTTGGTGC CGTTGCAGCC AAAAAATATG ATATTGAAGT TTGGATGCCA
GCGCAGCAGA AGTTCCGAGA AGTTGTGTCC TGCTCAAATT GCTTAGAATA TCAAGCCAGG
AGGTTAATGA TAAGGTACAG AGATAAGGGT GAGTTAAAAT TTGTGCATAC TCTAAACAGC
ACCGCATTGG CAACAACTAG AATTATGGTG GCAATAATGG AAAATTTCCA AGAGGATAGG
GGGATAAGAA TACCAAAAGC GCTTGTTCCT TACACTAGCT TTGAATACAT AGAGTTTGAG
AAAAGTTAA
 
Protein sequence
MIDIKLIRKN GDMIRDMLRK RFKDEKIVDE ILQYDNLWRE TLKEIEKLRH ERNKKSVEIG 
KLVKEGKDIK ELKDEMKELN RRIKELEENV EEYKKRRDYL LMRLPNLLLD DTPVCEGEEN
SPVVRTWGKA RVMEDNMEYF KNCSAGMDYE IIENKPESHV DIIEKYDLAD TARAGKIAGA
RFYYLKNELV ILEQSLIRFA LDHMVSKGYT PVAPPLMIRR AAMEGVIDFE AFEEMIYKIE
GEDLYMIATA EHPLVAMHMK EILDPNSLPL KYVGISPCFR KEAGAHGKDT KGIFRVHNFY
KVEQVVFSKP EESAILMEEL IKNAEEILQK LELPYRVINI CSGELGAVAA KKYDIEVWMP
AQQKFREVVS CSNCLEYQAR RLMIRYRDKG ELKFVHTLNS TALATTRIMV AIMENFQEDR
GIRIPKALVP YTSFEYIEFE KS