Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4324 |
Symbol | |
ID | 4667455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4803185 |
End bp | 4803931 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825510 |
Product | ABC transporter-related protein |
Protein accession | YP_972638 |
Protein GI | 120612960 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.103821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC ACGCCCCCCG CTCCCCCGCG CCGCCGCCCG GCACCGCTCC CAGCCTGCAG GCAGTGGACC TGCAGAAGTC CTTCGTCTCG GGCTTCGTGC AGGTGCCGGT GCTGCGCCAG CTGTCCCTGT CCATCCTCCC CGGGGAACTC ACCCTCATCT CCGGCCCCTC GGGCTGCGGC AAGAGCACGC TGCTGTCGCT GCTGTCCGGG CTGCAGCAGC CGGACGCGGG CAAGGCCTAT GCCCTGGGCG AGGACCTGGG AGCGCTCGGC CCGCGCGCGC TGGAACGCTT CCGGCTGCAG CACACGGGCT TCGTGTTCCA GGGCTTCAAC CTCTTTCCCG CACTGACCGC CCTGGAGCAG GTGCAACTGC CCCTGGGCTA CCTGGGCCTG GACGGCGGCG AAAGCGCGCG ACGGGCGCGG CGCGCCCTCG ACGAAGTGGG CATGTCGCAG CGCGCGCACA TGCGCCCGGC CCAGCTGTCC GGGGGCGAGA AGCAGCGCGT GGCCATCGCC CGCGCCATCG CCAAGTCGCC CCAGCTGCTC TTCGCCGACG AACCCACCAG CGCGCTGGAT GCCGACAGCG GACAGCGCGT CATCAACATC CTCCACCGCA TCGCACGCGC CCACGGCACC ACCGTGCTGT GCGTGAGCCA CGACCCGCGC CTCGTCCGCC ATGCCGACCG CGTGCTCGGC ATGGAAGACG GCGCCATCCG CAGCGACTGG CGCCAGCCGG ACGCCATCAC CCCATGA
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Protein sequence | MNTHAPRSPA PPPGTAPSLQ AVDLQKSFVS GFVQVPVLRQ LSLSILPGEL TLISGPSGCG KSTLLSLLSG LQQPDAGKAY ALGEDLGALG PRALERFRLQ HTGFVFQGFN LFPALTALEQ VQLPLGYLGL DGGESARRAR RALDEVGMSQ RAHMRPAQLS GGEKQRVAIA RAIAKSPQLL FADEPTSALD ADSGQRVINI LHRIARAHGT TVLCVSHDPR LVRHADRVLG MEDGAIRSDW RQPDAITP
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