Gene Aave_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3417 
Symbol 
ID4669531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3773155 
End bp3774024 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content72% 
IMG OID639824613 
Producthydratase/decarboxylase 
Protein accessionYP_971748 
Protein GI120612070 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.375509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.976889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC AGCAAACCCT CATCGCGGCG CTGGCCGCCG TCGCCTGCGT TACAGGAGCG 
CGGGCCGCGT GCCTGGACGA TGCGCAGGTG GCCGATCTCG CGGCGCACTA CATGGCCCGC
ACGCCCGCGG CCAATCCGCC GCCCATGGAC GCCGCCGATG CCGCCTGCAC CCGCGGCAAG
TTCAATGCGC TGCTGGAGCA GCGCCTGGGC CGGCCCGTCG GCTACAAGGC CGGCCTCACC
AACCCGGCGG TACAGCAGCG CTTCCGTACG GACCAGCCCG TGTGGGGCCG CCTCTATCCG
GGCATGGTGC TACCCTCCGG CAGCACCGTG GATGCTGCCT TCGGTGCACG GCCGCTCTAT
GAAGCCGACA TGCTGGTTCG CGTGAAGAGC ACAGCCGTCA ACCACGCGCG CACGCCGCTG
GAGGTACTGG ACGCCATCGA CCAGGTGATT CCCTTCATCG AACTGCCCGA CCTGCTGGTG
CAGGTGCCGC CCCAGCTCGA CGGGGCGGGC GTGGCTGCGA TCAACGTGGG TGCGCGCCTG
GGCGTGGCCG GCACGCCTAT CGCCGTGCCG GCGCTGCGGG CCGAGCGCTA CGCGATGCTC
GATGCCCTGG CCGCGATGAC GGTCACGCTC ACCGACGGCA CGGGCGCCAG GCTCGGCGGC
GGCCGCGGCA GCGACATCCT GGGGCATCCG CTGCAGGCCG TGGTGTGGCT GGCCGGTGCG
CTGCAGAAGG AAGACGCCGC GCTGAAGCCG GGCGACCTTG TCAGCCTGGG CTCGTTCTCC
GCATTGCTGC CGCCGCGGCC GGGCCTTGCG GTGACGGCCA CGTTCGCCGG ACTGCCGGGG
GCCGCGCCCG TGGAAGTGCG TTTCAGGTAA
 
Protein sequence
MALQQTLIAA LAAVACVTGA RAACLDDAQV ADLAAHYMAR TPAANPPPMD AADAACTRGK 
FNALLEQRLG RPVGYKAGLT NPAVQQRFRT DQPVWGRLYP GMVLPSGSTV DAAFGARPLY
EADMLVRVKS TAVNHARTPL EVLDAIDQVI PFIELPDLLV QVPPQLDGAG VAAINVGARL
GVAGTPIAVP ALRAERYAML DALAAMTVTL TDGTGARLGG GRGSDILGHP LQAVVWLAGA
LQKEDAALKP GDLVSLGSFS ALLPPRPGLA VTATFAGLPG AAPVEVRFR