| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3303 |
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| Symbol | |
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| ID | 4669146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3653809 |
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| End bp | 3655053 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639824501 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_971637 |
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| Protein GI | 120611959 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.176544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGGG CGCTCGCACG GCTGATCGCC GGCCAGGTAT GCATCCACGC CAGCATGACG
GGCATGCGCC TCGCGGCCCC GCTGCTGGCG CTGCGCGAGG GCTACAGCGC CGCGGCCGTG
GGCACCCTGC TGGCGCTGTT CGCGCTCACC CAGGTATTCC TGTCGCTGCC CGCGGGCCGG
TATGCCGACC GCCACGGCCT GAAGCGGCCG GTCGGCTGGG CGGTGGGCGT GGCCTGCGCG
GGCGCGGCCG GAGCGCTCGT CTGGCCGGCT TTCCCCATGC TCTGCCTGGC CGCGCTGCTG
ACCGGCGGGG CATCGGGCGC GGCCATGATC GCGCTGCAGC GCCACGTGGG CCGCGCGGCG
CACGATTCCG AGCAACTGCG GCGGGTGTTC AGCTGGCTGG CCATCGGCCC GGCGGTGTCG
AACTTCGTGG GGCCGTTTTT CACAGGCCTG CTGATCGACC ATGCGGGGCC CGTGCCCGGC
AGCACCGAAG GCTACCGCGC GGCCTTCGCA CTCACGGCGA TGCTGCCGGT GGCGACGTGG
TTCTGGGTGC GCGCCACGGT GGAGCTGCCC CCGATCGTGG CGCCCGAAGG CGGCACGCGC
CCCCGCGCCT GGGAACTGCT GGGCCATGCC GGGTTCCGCC GGCTGCTGTT CGTCAACTGG
CTGCTGTCCT CCTGCTGGGA CGTGCACACC TTCGTGGTGC CGCTGCTGGG GCACGAGCGG
GGTCTGTCCG CTTCGGTCAT CGGCTCCATC CTCGGTGCCT TCGCCATCGC GGCCGCGGCC
ATCCGCGTGC TCATGCCGAT CGTGGCCGCG CGCCTGAAGG AGGCCGCCGT GGTGACGTGG
GCCATGGTGG CGACCGCCTT GCTCTTCGCC GTCTATCCGC TGCTGCCCAG CGCGTGGGCG
CTCGGCCTGT GCTCGGTGCT GCTGGGGTTC GCGCTGGGTT CGGTGCAGCC CATGATCATG
AGCATGCTGC ACCAGATCAC GCCCCACCAT CGCCACGGCG AGGCGCTGGG CCTGCGCCTC
ATGGCGATCA ATGCGTCCAG CGTGGCGATG CCCGTGCTGT TCGGCTCGGC CGGCGCGCTG
ATCGGCGTGG CCGGACTGTT CTGGGTGGTG GGGGTGTCGT GGGGCTGGGT TCGAGGGTGG
CGCGCCGGCT GGGGGCCGTT GATCAGTGAT CCCTGCGCAT CCCGGCCGAA TTGGGGCGCG
AAGAAAGTAC ACCGTTGTCG ATCAGGTGCA GCAGCCCGCG TATGA
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| Protein sequence | MDGALARLIA GQVCIHASMT GMRLAAPLLA LREGYSAAAV GTLLALFALT QVFLSLPAGR
YADRHGLKRP VGWAVGVACA GAAGALVWPA FPMLCLAALL TGGASGAAMI ALQRHVGRAA
HDSEQLRRVF SWLAIGPAVS NFVGPFFTGL LIDHAGPVPG STEGYRAAFA LTAMLPVATW
FWVRATVELP PIVAPEGGTR PRAWELLGHA GFRRLLFVNW LLSSCWDVHT FVVPLLGHER
GLSASVIGSI LGAFAIAAAA IRVLMPIVAA RLKEAAVVTW AMVATALLFA VYPLLPSAWA
LGLCSVLLGF ALGSVQPMIM SMLHQITPHH RHGEALGLRL MAINASSVAM PVLFGSAGAL
IGVAGLFWVV GVSWGWVRGW RAGWGPLISD PCASRPNWGA KKVHRCRSGA AARV
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