Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1494 |
Symbol | |
ID | 4668370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1657097 |
End bp | 1658680 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639822697 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_969858 |
Protein GI | 120610180 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.101817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.2644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACGAC TGACCCTGCA GAGCAAAGCC TTCCTCGCGC TCAGCGTCCT GCTGGCCGTG TTGCTGGCAC TGTTCGTGGG GTTCTCCCGC CTGGGACTGC AGCGGGGGCT GGGCCCCTAC ATCGCAGAGA TCGAACTCGG CCGGCTGGAC TGGCTCGCAG GGCGGCTGGA ACGCGTCTAT GTGCTGCACG GCGGCTGGCA GACCCTGCGC ACGCAGCCCG AGCTGTGGCG CCAGATGCAC AAGCCCGGCG TTGCCCTGCC CCGGGCGACC TTCGGGCCCA CCCGACCCGC CCTGCCACCC GGCGGCGCGG CGCCACAGGG CGCACGGAAC GCACCCGCGA CGTGCGACGT GGATGCCTAT GCGTTCGGCG ATGGCACCCC CCCGGCCTCC GCCGGGACGC CGTCCGGTAA AGCCCCCTCC TCTCCCGATC CCAACCAGCA CGCGCTGTCG GTCCGCCTGG GGCTGATCGA CGGCGACCGC CAGCTGGTCG CCGGCGTCCA GCCGGTGCAG GGCACGGCCC GGCGCGTGCT GCGCGGCCCC CGCGGCGAAG CCATCGGCCA GCTCGTGCTG CTGCCGCCAC TGAACGTGGA AACCGAGGCG GACCAGGCCT TCCTGCGCCA GCAACTGGTG TTCGTCGCCT GGACGGGCGC CGCGGGCCTG ATCCTCGCGC TCTGGCTGTC CTGGTGGCTG GCCCGGCGCT GGCTGGCCCC CATCGGCGCG CTGGTCCACG CCGCGCGCCG GGTGGCCGGC GGACGGCTGG ACACGCGCGT GCCGGTGCAG GGCGACGACG AACTGGCCCG GCTCGCCTCC ACGTTCAACG ACATGGCGGA GCAGCTCGCG AACATGGAAG CCTCGCGCCG CCAGTGGATC GGCGACGTGG CGCACGAACT CCGCACGCCC CTGGCGGCCA TGCGCGCGGA AATCGAGGCC GTGCAGGATG GCGTGCGCAC CTTCGACGAC AGGACGGCGC TGCGCCTGCA CCGGCAGGTG ATGCGGCTGA TCCAGCTGGT GGGAGACCTG CGCGCGAGCC TCGACGCCGC GGGCGACGCC ACGCCCTCGG CGCCGGAGCC CGTGCAGCCG CTGCCCCTGC TGTCGGAGGC CGTCGCCTCG ATGCAGGCGC GCTTCGACAA CGCCGGCATC GCCCTGGACA TGTCCGCCGT GGACGCCTGC GCGGGCAGCC ACCCGCCCCC GGTGGTGCGG GGCGACCCGG CGCAACTGCA CCGCGTGTAC CTCAACCTGC TGGAAAACAG CCTGCGCTAC ACCGAAACGG GCGGCAGGCT CTGCATCGCC GCGCACACCG AACGCAAGGC GGGCGATGGT GCCTGGCTCG TGCTGCAATG GGACGATACG GCCCCCGGCG TCCCCGCACC GGAGCTGCCG CGTGTGTTCG ACCGGCTCTA CCGTGCCGAA GCCTCCCGCA CCCGCGCCGC GGGCGACACC GGCGGCTCCG GCCTGGGGCT GGCCATCTGC CGGGCCATCG TGCAGGCGCA CGGCGGACGG ATCACGGCCG AGGCCTCGCC GCTGGGCGGC CTGCGCATTC TTCTCACCCT GCCCTTGCTG GAGACCCCCA TCCATGACCG ATGA
|
Protein sequence | MPRLTLQSKA FLALSVLLAV LLALFVGFSR LGLQRGLGPY IAEIELGRLD WLAGRLERVY VLHGGWQTLR TQPELWRQMH KPGVALPRAT FGPTRPALPP GGAAPQGARN APATCDVDAY AFGDGTPPAS AGTPSGKAPS SPDPNQHALS VRLGLIDGDR QLVAGVQPVQ GTARRVLRGP RGEAIGQLVL LPPLNVETEA DQAFLRQQLV FVAWTGAAGL ILALWLSWWL ARRWLAPIGA LVHAARRVAG GRLDTRVPVQ GDDELARLAS TFNDMAEQLA NMEASRRQWI GDVAHELRTP LAAMRAEIEA VQDGVRTFDD RTALRLHRQV MRLIQLVGDL RASLDAAGDA TPSAPEPVQP LPLLSEAVAS MQARFDNAGI ALDMSAVDAC AGSHPPPVVR GDPAQLHRVY LNLLENSLRY TETGGRLCIA AHTERKAGDG AWLVLQWDDT APGVPAPELP RVFDRLYRAE ASRTRAAGDT GGSGLGLAIC RAIVQAHGGR ITAEASPLGG LRILLTLPLL ETPIHDR
|
| |