Gene Aave_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1494 
Symbol 
ID4668370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1657097 
End bp1658680 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content73% 
IMG OID639822697 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_969858 
Protein GI120610180 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.101817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.2644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGAC TGACCCTGCA GAGCAAAGCC TTCCTCGCGC TCAGCGTCCT GCTGGCCGTG 
TTGCTGGCAC TGTTCGTGGG GTTCTCCCGC CTGGGACTGC AGCGGGGGCT GGGCCCCTAC
ATCGCAGAGA TCGAACTCGG CCGGCTGGAC TGGCTCGCAG GGCGGCTGGA ACGCGTCTAT
GTGCTGCACG GCGGCTGGCA GACCCTGCGC ACGCAGCCCG AGCTGTGGCG CCAGATGCAC
AAGCCCGGCG TTGCCCTGCC CCGGGCGACC TTCGGGCCCA CCCGACCCGC CCTGCCACCC
GGCGGCGCGG CGCCACAGGG CGCACGGAAC GCACCCGCGA CGTGCGACGT GGATGCCTAT
GCGTTCGGCG ATGGCACCCC CCCGGCCTCC GCCGGGACGC CGTCCGGTAA AGCCCCCTCC
TCTCCCGATC CCAACCAGCA CGCGCTGTCG GTCCGCCTGG GGCTGATCGA CGGCGACCGC
CAGCTGGTCG CCGGCGTCCA GCCGGTGCAG GGCACGGCCC GGCGCGTGCT GCGCGGCCCC
CGCGGCGAAG CCATCGGCCA GCTCGTGCTG CTGCCGCCAC TGAACGTGGA AACCGAGGCG
GACCAGGCCT TCCTGCGCCA GCAACTGGTG TTCGTCGCCT GGACGGGCGC CGCGGGCCTG
ATCCTCGCGC TCTGGCTGTC CTGGTGGCTG GCCCGGCGCT GGCTGGCCCC CATCGGCGCG
CTGGTCCACG CCGCGCGCCG GGTGGCCGGC GGACGGCTGG ACACGCGCGT GCCGGTGCAG
GGCGACGACG AACTGGCCCG GCTCGCCTCC ACGTTCAACG ACATGGCGGA GCAGCTCGCG
AACATGGAAG CCTCGCGCCG CCAGTGGATC GGCGACGTGG CGCACGAACT CCGCACGCCC
CTGGCGGCCA TGCGCGCGGA AATCGAGGCC GTGCAGGATG GCGTGCGCAC CTTCGACGAC
AGGACGGCGC TGCGCCTGCA CCGGCAGGTG ATGCGGCTGA TCCAGCTGGT GGGAGACCTG
CGCGCGAGCC TCGACGCCGC GGGCGACGCC ACGCCCTCGG CGCCGGAGCC CGTGCAGCCG
CTGCCCCTGC TGTCGGAGGC CGTCGCCTCG ATGCAGGCGC GCTTCGACAA CGCCGGCATC
GCCCTGGACA TGTCCGCCGT GGACGCCTGC GCGGGCAGCC ACCCGCCCCC GGTGGTGCGG
GGCGACCCGG CGCAACTGCA CCGCGTGTAC CTCAACCTGC TGGAAAACAG CCTGCGCTAC
ACCGAAACGG GCGGCAGGCT CTGCATCGCC GCGCACACCG AACGCAAGGC GGGCGATGGT
GCCTGGCTCG TGCTGCAATG GGACGATACG GCCCCCGGCG TCCCCGCACC GGAGCTGCCG
CGTGTGTTCG ACCGGCTCTA CCGTGCCGAA GCCTCCCGCA CCCGCGCCGC GGGCGACACC
GGCGGCTCCG GCCTGGGGCT GGCCATCTGC CGGGCCATCG TGCAGGCGCA CGGCGGACGG
ATCACGGCCG AGGCCTCGCC GCTGGGCGGC CTGCGCATTC TTCTCACCCT GCCCTTGCTG
GAGACCCCCA TCCATGACCG ATGA
 
Protein sequence
MPRLTLQSKA FLALSVLLAV LLALFVGFSR LGLQRGLGPY IAEIELGRLD WLAGRLERVY 
VLHGGWQTLR TQPELWRQMH KPGVALPRAT FGPTRPALPP GGAAPQGARN APATCDVDAY
AFGDGTPPAS AGTPSGKAPS SPDPNQHALS VRLGLIDGDR QLVAGVQPVQ GTARRVLRGP
RGEAIGQLVL LPPLNVETEA DQAFLRQQLV FVAWTGAAGL ILALWLSWWL ARRWLAPIGA
LVHAARRVAG GRLDTRVPVQ GDDELARLAS TFNDMAEQLA NMEASRRQWI GDVAHELRTP
LAAMRAEIEA VQDGVRTFDD RTALRLHRQV MRLIQLVGDL RASLDAAGDA TPSAPEPVQP
LPLLSEAVAS MQARFDNAGI ALDMSAVDAC AGSHPPPVVR GDPAQLHRVY LNLLENSLRY
TETGGRLCIA AHTERKAGDG AWLVLQWDDT APGVPAPELP RVFDRLYRAE ASRTRAAGDT
GGSGLGLAIC RAIVQAHGGR ITAEASPLGG LRILLTLPLL ETPIHDR