| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1030 |
|---|
| Symbol | |
|---|
| ID | 4668867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1129348 |
|---|
| End bp | 1129797 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639822229 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_969401 |
|---|
| Protein GI | 120609723 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5573] Predicted nucleic-acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.446924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CGCTGTTCGT GGATACCGGC GTGCTGCTCA GCAGCGTGGA TGACCGCGAT
CCCGTCCGCC AGTCCCGTGC CCGCGAATGG CTCGCGCTGT GCTGGAACAC GCGCCGTGGC
CGCATCAGCT CGCAGGTGCT CAACGAGCTC TACCACAATG CCGTCGCCTG CTTCCCCGGC
CCGCAGACGC TGCACCTGGT GCGCGCGCAG GTGCGTCGCC TGCGCGTCTG GCAGCCGCCG
CACCTCGACG CCTATGTGGT CGATGGCGCC TGGGACCTGC AGGACCGCTA CGGCCTGAGC
TACTGGAACG CGCTCATCGT CGCTTCCGCG CACCAGCAGG GCTGCCGCCA CGTGCTGGGC
GACGTGCTGC CGCACGGGCA GCGGTACGAC GCGGTGCGCG CCGTGAATCC CTTTCTACTG
GCTCCCGACG AACTGGAATC GCTCGAATGA
|
|---|
| Protein sequence | MNAPLFVDTG VLLSSVDDRD PVRQSRAREW LALCWNTRRG RISSQVLNEL YHNAVACFPG
PQTLHLVRAQ VRRLRVWQPP HLDAYVVDGA WDLQDRYGLS YWNALIVASA HQQGCRHVLG
DVLPHGQRYD AVRAVNPFLL APDELESLE
|
|---|
| |