Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0518 |
Symbol | |
ID | 4665857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 560894 |
End bp | 562900 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639821724 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_968898 |
Protein GI | 120609220 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA GGCCGCGCAC CATCCCCGAC TACGTAGAGT TGCGCTGCGT GTCGAACTTC ACTTTCCTGC GCGGCGCGAG CGACCCGGAG GAACTGGTGC GCCGCGCGCA GGAGCTGGGC TACAGCGGGC TGGCCCTCGC GGATGAATGC AGCATGGCGG GCGTGGTACG GGCCCATGTG GCGGCGAAGG CGGCAGGGCT GCGCCTGATC CTCGGTGCGC AGTTCTGCGT GCAGCCGCGC ACCGCGGAAG AGGCACGCTT CACGGTGGTG GTCCTCGCGC GGAACCTCAA CGGGTACGGC AACCTCTGCG AGTTCATCAC GAAGCTGCGG CGCTCATCGG CCAAGGGCGA GTACCACCTG ACGCAGGGAC AGATCACCGG GGCCGAGCTC GCTGACTGCC TTGCGCTGCT CTGCCCCGAT CGCCCATCCA CCGATGCGCA GCTGGAGGCC GCGGGGACCT GGGCGCTGCA GCAGTTCCGC GGGCGATGCT GGATCGGCGT GGACCAGGTG CGGCAATTGG ACGACGAGGC ATGGTTGCAT CGCATGCGCA CGCTCGCGGA ACTGACGGCC CTGCCTTTGG TGGCCGTGGG CGACGTGCAT ATGCACGTGC GGTCGCGCAA GCCGCTGCAG GACGTGTTGA CGGCCACGCG GATCGGCAAG CCGCTCACGG AATGCGGGCA CGCGCTGCAC CGCAGCGCTG AGCGCCACCT GCGCACGCGG CTCCGGTTGG CGCAGACCTT TCCGGCCGAT CTGCTCGCCG AGACGTTGAA CGTGGCCGCG CGCTGCAGCT TCTCCATCGA CGAATTGAAG TACCAGTACC CCGACGAGGT CGTACCGCGC GGTCACACGG CGGCTAGCTT CCTGCGACAG GTCACTTATG AGGGCGCGGG CCGGCGGTGG CCGGAAGGTA TCTCACCCAC GGTACAGGCA CAGATCGAAC ACGAACTGGA GCTGATCTGC GAACTGCGCT ACGAGCACTA CTTCCTCACC GTGTATGACA TCGTGGCCTT CGCGCGATCG CGGCACATCC TCTGCCAGGG CAGGGGCTCG GCCGCCAACA GCGTGGTCTG CTACTGCCTG GGCGTGACCG AGGTGGACCC GGCGCGTATG TCGGTGCTGT TCGAGCGCTT CATCAGCAGG GAGCGCAACG AGCCGCCGGA CATCGACGTG GACTTCGAGC ACCAGCGGCG CGAGGAGGTG ATCCAGTACC TGTACACGAA GTACGGCCGC GACCGGGCGG CTCTCACGGC CACGGTCATC AGCTACCGGC CGAAATCGGC GATCCGGGAT GTGGGCAAAG CCTTGGGGTT CGACCTGCAG ACGCTGGATG CGCTTGCGGA AGGTCAGAAG TGGTTCGACG GGGAGGACAT CCGCCTGGAG CGCTTCGAGG AACTGGGCAT GTCCGTGTCG GACCTTGCAG TGCGCCAACT CATCACGCTG ACCACCCAGC TGATCGGCTT TCCCAGGCAT CTCTCCCAGC ACACAGGCGG CTTCGTGCTC ACGCGCGACC GGCTGTCCCG CATGGTGCCG ATCGAGAACG CGTCCATGGC CGACCGGACC GTGATCGAAT GGGACAAGGA CGACCTGGAT GCCGCGGGCC TGCTGAAAGT CGATGTGCTC GCACTGGGCA TGCTCTCGGC CATCCGGCGC GCGCTCGACA TGATCGGACT GCGCCGCGGC TACGCGTTCG GCATGCAGGA CATCCCCGCG GAGGACAGCG ATACCTACGA CATGATCTGC AGGGCCGACA CGATCGGCGT GTTCCAGATC GAGAGCCGTG CGCAGATGAG CATGCTGCCG CGGCTGCGTC CGCGCTGCTT CTACGACCTC GTGATCGAGG TGGCAATCGT GCGGCCTGGG CCGATCCAGG GCGGAATGGT GCATCCGTAC CTCAACCGGC GACAGGGCAA GGAGCCCGTG ACGTACCCGA GCGAGGCGCT CAAGACCGCA CTGGGACGGA CCCTGGGTGT GAAGTTGTCC CGCTTCCACG GACGGTTATC GGCTTGA
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Protein sequence | MNRRPRTIPD YVELRCVSNF TFLRGASDPE ELVRRAQELG YSGLALADEC SMAGVVRAHV AAKAAGLRLI LGAQFCVQPR TAEEARFTVV VLARNLNGYG NLCEFITKLR RSSAKGEYHL TQGQITGAEL ADCLALLCPD RPSTDAQLEA AGTWALQQFR GRCWIGVDQV RQLDDEAWLH RMRTLAELTA LPLVAVGDVH MHVRSRKPLQ DVLTATRIGK PLTECGHALH RSAERHLRTR LRLAQTFPAD LLAETLNVAA RCSFSIDELK YQYPDEVVPR GHTAASFLRQ VTYEGAGRRW PEGISPTVQA QIEHELELIC ELRYEHYFLT VYDIVAFARS RHILCQGRGS AANSVVCYCL GVTEVDPARM SVLFERFISR ERNEPPDIDV DFEHQRREEV IQYLYTKYGR DRAALTATVI SYRPKSAIRD VGKALGFDLQ TLDALAEGQK WFDGEDIRLE RFEELGMSVS DLAVRQLITL TTQLIGFPRH LSQHTGGFVL TRDRLSRMVP IENASMADRT VIEWDKDDLD AAGLLKVDVL ALGMLSAIRR ALDMIGLRRG YAFGMQDIPA EDSDTYDMIC RADTIGVFQI ESRAQMSMLP RLRPRCFYDL VIEVAIVRPG PIQGGMVHPY LNRRQGKEPV TYPSEALKTA LGRTLGVKLS RFHGRLSA
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