Gene Aasi_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1400 
Symbol 
ID6377581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1785509 
End bp1785934 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content35% 
IMG OID642682471 
Producthypothetical protein 
Protein accessionYP_001958425 
Protein GI189502708 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG AAATTGTAGG CTACTTAAAA CTTCAAGTAA AAGGAGGTGA AGCAAAACCA 
GCACCTCCAG TAGGACCTGC GCTAGGTAGT AAAGGATTAA ATATCATGGA GTTCTGTAAG
CAGTTTAATG CTAGAACACA AGATAAGCAA GGCCAAATAC TTCCTGTTTT AATAACCATT
TATCAAGATA AAACTTTTGA TTTTGTTATT AAGACTCCTC CTGCTGCTGC TTCTATTATG
CAAAAGGCTG GTATTTCTAA AGGGTCTTCA GAATCTAATA GAAATAAAGT AGGAGTTATA
ACATGGTCTG CTATAAAAGA GATTGCTGCA TCTAAAATGG AAGATCTAAA TACCATTAAC
TTAGAGTCTG CCACAAAAAT GATAGCAGGT ACAGCAAGAA GTATGGGAGT AACCATAAAA
GAATAA
 
Protein sequence
MAKEIVGYLK LQVKGGEAKP APPVGPALGS KGLNIMEFCK QFNARTQDKQ GQILPVLITI 
YQDKTFDFVI KTPPAAASIM QKAGISKGSS ESNRNKVGVI TWSAIKEIAA SKMEDLNTIN
LESATKMIAG TARSMGVTIK E