Gene Aasi_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1048 
Symbol 
ID6377056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1358240 
End bp1359238 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content36% 
IMG OID642682164 
Producthypothetical protein 
Protein accessionYP_001958125 
Protein GI189502408 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGCAAG ATCAAGAAGC AAAAAGTTTA GCACCTGATT TTTGGGAAAA TACTTCTCAG 
GCTGAAGTAA TCTTACGCAA TTTAAAAATA ACAAAATCTT GGATTGATGC TTTTGACCAT
GTAGAGAGTC TACTAGAAAA TTTGGAAGTA ACACAATTAT TTTATGAAGC TGGCGATGTG
GATGAAACAG AAGTAGAAAA AGCCTATCAG AATTTGTTAA CAGGCCTAGA AGCACTTGAG
GTAAGAAAAA TGTTGCAAAA TGAGGAAGAC GAAAATTCTG CGATTATAGA GATCAATCCT
GGCGCAGGAG GTACAGAAAG CCAAGATTGG GCTGAAATGC TAACCAGAAT GTATATTATG
TGGGGAGAAA AACACAATTA TACGGTTAAA GAGCTAGCAT ACCAACGTGG AGATGTAGCA
GGGGTCAAAT CTGCGACTTT AGAAATAACA GGTACATTTG CTTATGGATA TCTTAAATCA
GAAATTGGTA TTCACCGACT TGTACGTATC TCTCCTTTTG ATGCAGCTGG AAAAAGGCAT
ACTTCATTTG CTTCCATATA TGTATATCCT GTTGTAGAAA ATAATATTCA AATAGATATC
AACCCAGCAG ATATTACTTG GGATACGTTT CGTGCTGGAG GTGCTGGTGG GCAAAATGTT
AATAAAGTAG AGACAGCAGT AAGACTAAAA CATGCTCCCT CTGGTATCAT TGTAGAATGT
CAGCAAGAAC GTTCGCAAGC ACAAAACAAA GAAAAGGCAC TCAGAATATT AAAATCTAAA
CTTTATCAAC TAGAACTAGA TAAAAGGAAT GCTGAAAAAG AGAAAATGGA AAGTTCTAAA
AAAAGGATAG ATTTTGGTTC TCAAATCAGG AATTATGTAT TGCATCCTTA CAAACTAGTT
AAAGACAACA GAACAGATGT TGAAACATCA GATACGTCAG GCGTCTTGAA TGGTAATATA
GATGAGTTTA TAAAAGCCTA CTTAATGCAT TATGCATAG
 
Protein sequence
MLQDQEAKSL APDFWENTSQ AEVILRNLKI TKSWIDAFDH VESLLENLEV TQLFYEAGDV 
DETEVEKAYQ NLLTGLEALE VRKMLQNEED ENSAIIEINP GAGGTESQDW AEMLTRMYIM
WGEKHNYTVK ELAYQRGDVA GVKSATLEIT GTFAYGYLKS EIGIHRLVRI SPFDAAGKRH
TSFASIYVYP VVENNIQIDI NPADITWDTF RAGGAGGQNV NKVETAVRLK HAPSGIIVEC
QQERSQAQNK EKALRILKSK LYQLELDKRN AEKEKMESSK KRIDFGSQIR NYVLHPYKLV
KDNRTDVETS DTSGVLNGNI DEFIKAYLMH YA