Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2940 |
Symbol | |
ID | 7135926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2627701 |
End bp | 2628435 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643531291 |
Product | TonB-dependent receptor domain protein |
Protein accession | YP_002427307 |
Protein GI | 218666257 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00105315 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACGGTT ACATAGATCT AAACAGCCTG AAACCGGTAA AAAGTACGGA TTACGAAGTC GGCGCCAAGT TTTTAGTACA CAACTGGATG TTGTTGCATA ACTTTACATT CAACGTCAAC TACTACCACG ACAGTCTCGC CAACGAAACC ATCGCGACCT TCCTGTCAAA CATCTCCCAA ACCAAGTTCG CCGCGGCCGA TGCGGTGGTG AACGGCGTCA ATATCGCGAT GGCCGACAAC CCCTCCTGGA ACTGGCATCT GTTCGCCAAT CTGGCGCTCA ATCATTCGTA CTACACCTCG TATACGCCGC AGGGTGGAGG TACGACCTTG TATGGCGCCA ACGTATCTTA TAGCCCGTAC CTCACCATGA GCGCGGGTAT TGACTATCGC TACTATTATC ATGGATTCCT TTTCTCGCCC CAGTTTGTGG ATCAATACAC AAGCTCGGAG TATCTATTCA ACAACGGGAC CGGCGCGCCA TCGCACCAGA AGCAGCCGGG ATACAATGTC TCCAACCTCA GCCTTGGGAT AAAAACGACC CGATTGAATC CATACATCCC GACACTGAAA GATGTGAAGC TCTCCGTGGG AATATACAAT CTCTTTGATG CGCGCTATAA CCCCATTGAG TACATCACCA GTGGTGGATA CTTCGGTGGC AACAGTGCCG GCGCCATTCT GGCTGATCCG GGGGCCCCAC GGCAGTATTT TATGACGGTA TCGGCGAAGT TCTAA
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Protein sequence | MDGYIDLNSL KPVKSTDYEV GAKFLVHNWM LLHNFTFNVN YYHDSLANET IATFLSNISQ TKFAAADAVV NGVNIAMADN PSWNWHLFAN LALNHSYYTS YTPQGGGTTL YGANVSYSPY LTMSAGIDYR YYYHGFLFSP QFVDQYTSSE YLFNNGTGAP SHQKQPGYNV SNLSLGIKTT RLNPYIPTLK DVKLSVGIYN LFDARYNPIE YITSGGYFGG NSAGAILADP GAPRQYFMTV SAKF
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