Gene AFE_2893 details

Gene Information

• Locus tag: AFE_2893
• ID: 7136436
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 2568250
• End bp: 2570112
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643531244
• Product: ABC transporter, ATP-binding protein
• Protein accession: YP_002427261
• Protein GI: 218666239
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.669618
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTATTC TGCGGCTGGA GGCAGGGCAA GTGGAATGGG GTGGCCGGGC GCTGCTGGAC 
CATGCCGAGT TGAATCTGGA GGCCGGCGAG CGGGTCGGCC TGATCGGCCG CAACGGTGAA 
GGCAAGTCTA CCCTGCTGCA AGTGCTGGCA GGTCTCTGTC CCCTCGATGC GGGAACGCTG 
TGGGTGGCGC CCGGTATACG CCGGGCCTAC TTGGCGCAGG AGCCAGAACT GGCCGGTGAG 
CACGACCTGC TCACCGCCAT CAAATCCGGG CATCCTGCCT GGCGGCACTT GCAGAATGCC 
GATGCGGACG ACGCCCATGC CCATGCCCTT GCCGACCATC ACGATGCCTG GCAGATCGAC 
TACAAGGCGG AGGCCCTGCG CGACAGCCTG GGGCTGCCCG CTGAAGGGGT GGTCAGCGCT 
CTTTCCGGCG GCCAGCGCAA GCGGGTAGCC ATCGCCGCCA CCCTGGTCGC CGAGCCGGAT 
CTGCTCTTTC TCGACGAACC CACCAACCAT CTCGATCTGC CCGCGATCCT GGCGCTGGAA 
CAATCCCTGC TGCGCCATCG CGGCACGCTG GTCTTCGTCA CTCACGACCG GCGTTTTCTC 
GACCGGCTGG CGACCCGCAT CATCGAACTG GACCGTGGGA TACTACGCAG TTTTCCCGGC 
ACTTTTGCGG CTTATCTAAG CCGCAAGGCC GAAGTCCTCG CTGCCGAGGC TGCGGCGGAC 
AGCCGTCTGG AAGGTCAACT GGCGGAAGAG GAGGCTTGGC TGCGCCAAGG GGTCAAGGCC 
CGCGCCAAGC GCAACCAGGG CCGCCTGCGC CGTCTGGAGG GGCTGCGTGA GGAGCGTGCC 
AGCCGTCGCC AGCAGCAGGG GCAGGCCACC CTGCAAATCA GCACGGCGGA TCGTTCCGGC 
GTACTCATTG CCGAGCTGGA TCATGTGTCT TTTGCCTATG GTGGGCGTCC GGTCATTCGC 
GATTTTTCCA CCCGCATCGA ACGCGGCGAC CGGGTTGGCA TTATCGGCCC CAATGGGGCG 
GGCAAGACGA CACTGCTGCG CCTGATCCTG GGCGAACTGG AGCCACAGGA GGGTACCGTC 
CGCCGCGGCA CCAAGCAGGA GGTCGCCTAC TTCGACCAGA TGCGCGCCAC CCTCGACCCG 
GAAAGCCGGG TGTTGGACGC CATTGCGGAC GGGAATGATT TTATCGACAT CAATGGCGAA 
CGCCGTCACG TGCTGAGCTA TCTGCAGGAT TTCCTCTTCC CGCCCAGCCG GGCGCGGGGG 
CTGATCAAAG CGCTCTCCGG CGGCGAGCGC GCACGTTTGC TGCTGGCCCG CCTGTTTGCC 
CGCCCCGCCA ATATTCTGGT GCTGGACGAA CCCACCAACG ACCTGGACCT GGAGACGCTG 
GAGGTGCTCG AAGAACGTTT ACAGAGTTAC GCCGGCACGA TCTTCCTGGT GTCCCATGAC 
CGAGACTTTC TCGATAACGT GGTCACCCAG GTGATCGCCT TCGGGGAAGA CGGGCAGATC 
AGCCAGAATG CGGGCGGCTA CGAGGACTGG CTGCGCTGGC AGATGGAGTC GCAGCGCACG 
GCAAAATCGG TAGAAGGTGG CGGCGGCAAG GGTTCCGGCA AGCGGGATGG CGGCAAGGGC 
AGAAAATCCG CCATGAGCTA CAAGGAGAAC CAGGAACTCG CCGCCTTGCC GGCGCAGATC 
GAGGCGCTGG AGAAAGAAGA GGGTGAAATC GCCGCCTTGC TGGCCCTGCC GGAAACCTAC 
CAGAACCCGG AGCGCTTGCG CGAGGTGCAG GCCCGCGCCG ATGTCGTCAG TGCGTCTTTA 
AAGAAAGCTT ATGGGCGCTG GGAGGCGCTG GAAGAAAAGG CGGCCCGGGC TGCCGACTTT 
TAG 

 

Protein sequence

MSILRLEAGQ VEWGGRALLD HAELNLEAGE RVGLIGRNGE GKSTLLQVLA GLCPLDAGTL 
WVAPGIRRAY LAQEPELAGE HDLLTAIKSG HPAWRHLQNA DADDAHAHAL ADHHDAWQID 
YKAEALRDSL GLPAEGVVSA LSGGQRKRVA IAATLVAEPD LLFLDEPTNH LDLPAILALE 
QSLLRHRGTL VFVTHDRRFL DRLATRIIEL DRGILRSFPG TFAAYLSRKA EVLAAEAAAD 
SRLEGQLAEE EAWLRQGVKA RAKRNQGRLR RLEGLREERA SRRQQQGQAT LQISTADRSG 
VLIAELDHVS FAYGGRPVIR DFSTRIERGD RVGIIGPNGA GKTTLLRLIL GELEPQEGTV 
RRGTKQEVAY FDQMRATLDP ESRVLDAIAD GNDFIDINGE RRHVLSYLQD FLFPPSRARG 
LIKALSGGER ARLLLARLFA RPANILVLDE PTNDLDLETL EVLEERLQSY AGTIFLVSHD 
RDFLDNVVTQ VIAFGEDGQI SQNAGGYEDW LRWQMESQRT AKSVEGGGGK GSGKRDGGKG 
RKSAMSYKEN QELAALPAQI EALEKEEGEI AALLALPETY QNPERLREVQ ARADVVSASL 
KKAYGRWEAL EEKAARAADF