| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2348 |
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| Symbol | |
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| ID | 7136285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2092821 |
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| End bp | 2093615 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530713 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_002426740 |
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| Protein GI | 218667427 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.042137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAACATC CTTCAGATCA TAGTCCAAAG TTTGGCCAAG ACCAAAGTGC CCCCCGCTTT
GGGCTTGCCC GCATCCTCTC CAAAGCGGGG CTGTGCTCCC GGACCGTTGC GGTGGAATGG
ATTCGTGCCG GGCGGGTAGA GGTAGACGGT CGCCGGATCC TCGATCCCGA GGCACGCTTC
CCCCTGTCCG GCCCCGGTAT CCGGATCGAT GGTCTCGACA TCACCGCCAG CACCCGCCAG
GTTTTGCTGT TACATAAACC CCGCGGCGTT CTTACTACTC GTCAGGATGA AAGAGGACGT
GCCACCGTAT ACGACCTGCT GCCCGGGAGT CCATGGCTGG CCCCCGTCGG ACGCCTGGAT
CAGGCCAGCT CCGGCCTGCT GCTTTTCAGC AACGATCCAC ACTGGGCGCA ACGACTGCTG
GATCCGGATC AGCATGTGGC CAAGACCTAT CATGTGCAGA TTCGCCCGCC CCTCTCCACC
GACACCGTAG TCCAACTCGC GGCTGACTCC GTGCTCGACG GCGAACCGTG CTTACCGATG
CAGATCAGGG AGTTACGCTG CGGCGGCAAA ACCCAATGGC TGGAGTTTAT TTTGCAGGAA
GGGCGCAATC GCCAGATTCG GCGCCTCCTT GCCGCCTGTG ATAGGGAAGT GTTGCGACTG
ATTCGCGTAG CGGTGGGAAA TCTGCCTCTC GGCGAACTGC GGGCCGGTGA ATGGCGCTGG
TTGCATAGTG GTGAGGAAGA GCTGCTACGT CAGACGCCCA CGCCCGGTGA TATCCCCTGC
CTACCGTCAG AATGA
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| Protein sequence | MKHPSDHSPK FGQDQSAPRF GLARILSKAG LCSRTVAVEW IRAGRVEVDG RRILDPEARF
PLSGPGIRID GLDITASTRQ VLLLHKPRGV LTTRQDERGR ATVYDLLPGS PWLAPVGRLD
QASSGLLLFS NDPHWAQRLL DPDQHVAKTY HVQIRPPLST DTVVQLAADS VLDGEPCLPM
QIRELRCGGK TQWLEFILQE GRNRQIRRLL AACDREVLRL IRVAVGNLPL GELRAGEWRW
LHSGEEELLR QTPTPGDIPC LPSE
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