Gene AFE_2209 details

Gene Information

• Locus tag: AFE_2209
• ID: 7137256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1960136
• End bp: 1960750
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643530576
• Product: transcriptional regulator, TetR family
• Protein accession: YP_002426607
• Protein GI: 218666691
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACAGC CCCTACGGAA AACCCGTAAC CCGGAGCAGA CCCGCAGCGA TCTACTGGAC 
GCCGCCTATA TCGAGATTTT GGAATCCGGC TTTCAGGCGG CCAGCCTGGA ACGCATTCTT 
GCCAATACCT CGGTAAGCAA AGGCGCGCTC TACCATCACT TCGGCACCAA GCGCGAACTG 
GGGCTGGCCG TAGTCGAAGA AGTGATTGCG CCGCAACTTG CGGTGCGGTG GTTCGCCCCT 
TTTGCCGAGC ACGATGACCC TTTGGTCAGC CTCCAGCGTA TTCTCGAAGA AAAAATCACT 
ACTGCCGACG AATCCGTCAT CCGCTACGGC TGTCCCCTCA ATAATCTCAT CCAGGAGATG 
AGCCCCCTCG ATGAGGCGTT CCGCTGCGGG TTGCAGCAGA TTCTCGATCG CTGGGTCGCG 
GTCATGGCCG ACGCCTTGGC CAGGGGGCAG ACCGCCGGCA AGGTGCGCAC CGACGTCGAG 
GCGAAAGAGG TAGCACTCTT CATCGTTGCC GCCATCGAAG GCTGCGTCGG CCTGGGCAAA 
AATGCGCAGT CCGTCGAAGC CTATCGGCGT TGTTTGCGAC AGTTGCAACT CTACGTCCAG 
TCACTGGCCG CCTGA 

 

Protein sequence

MIQPLRKTRN PEQTRSDLLD AAYIEILESG FQAASLERIL ANTSVSKGAL YHHFGTKREL 
GLAVVEEVIA PQLAVRWFAP FAEHDDPLVS LQRILEEKIT TADESVIRYG CPLNNLIQEM 
SPLDEAFRCG LQQILDRWVA VMADALARGQ TAGKVRTDVE AKEVALFIVA AIEGCVGLGK 
NAQSVEAYRR CLRQLQLYVQ SLAA