Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1856 |
Symbol | |
ID | 7136781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1611053 |
End bp | 1612561 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643530233 |
Product | dehydrogenase, homolog |
Protein accession | YP_002426271 |
Protein GI | 218667376 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.584342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCATCA TCGGCAGCGG CGCCGGCGGC GGCACCCTGG CCCGCGCCCT CGCCCCATCA GGACTGTCCA TCCTCATCCT CGAACGCGGC GACTACCTCC CCCGCGAATG GGGCAACTGG GACCCACACA CCGTCTTTGC CGAACACCGC TACCATACCC CTGAACAGTG GCACGATGGC GACGGCCAGA TTTTCACCCC CGTTACCGGC TATCATGTGG GGGGCAACAC CAAGTTCTAC GGGGCGGCCG TTTTGCGCCG GCGCGAAAAA GATTTCCTTC CCCGTCACCA TCGCGACGGC CTCACCCCCG CCTGGCCCAT CGCCTACGCC GATCTCGCGC CCCACTATGA CCAGGCCGAG GCCTGGTACT TCACCCACGG TCAGGCCGGT GCCGATCCCC TGGAACCGCC CCGCGGTCCC TTCGCCTTCC CCCCTTTCCC CCACGAGCCC CTCCTCGCAG CCCTGGAGCA AAAATTGCGG AATATGGGGT TGCACCCCTT TCCCCTCCCC CTCGCCCTCC ACCGCAACGA GGAAGACCCC GCCCATAGCC CTTGCGTGCG TTGTCCCACC TGTGACGGCT TCCCCTGCCT GCTGCACGCC AAGGGCGATG CCGAAGTCTG CGGTGTCACC CCCGCCCTGG CCCACGCCAA CGTCCGCCTG CTCACCCGGC ATCGCGTCCT GCGCCTGCTG CCTGGCGGCG ACGGCAGGGG TGTGGAAGGT GTGGAAACCG ATCAGGGCAC CCTGCGCGCC CGCGTCGTCG TCCTTGCCGC CGGCGCCGTA AACTCCGCCG CCCTCCTCCT CGCCTCCGCC GATGCCGCCG CGCCCCAAGG TCTCGCCAAC AGCAGCGATC AGGTCGGGCG CAACTACATG TGCCATCTCA ATAGCGCCTG CATGGCCCTC AAAGCCGCCC AGGAAAACAC CACCGTCTTC CAGAAAACCC TGGCCATCAA CGATTTTTAC GACGACTCGG GCGACCCCGA TTATCCCTAT CCCCTCGGCC ACATCCAGAA TCTCGGCAAG GTCACGCCGG CGCTGCTCCA TGCCCAACAG CCCCTGCTCC CCATTCCCCT CGTCGCCTGG ACCGCCAGCC ACTCCGTGGA CTGGTGGCTC ACCACCGAAG ACCTGCCCGA CGCCGGCAAC CGGGTCACCC TCGACAGCGA CGGCCATATC CGCCTCGCGT GGCAACCCAA AAACCGCGAA AGCCACCAGC GCCTCTGTGA CCAATGGCGC AAGATTCTCC ACCAGGCCGG CTTTCCCATG GTCTTCTTTC AGGCCATGGA CATCTCCGCC ACTGCCCATC AGGTGGGCAC CTGCCGTTTT GGCGAAGACC CTGCGGACAG TGTCCTGGAT CCCTGGTGCA GGGCCCATGA CCTCGCCAAC CTCTATGTCG TGGACGCCTC CTTCATGCCC TCCATCAGCG CGGTCAACCC CTCCCTCACC ATCATGGCCA ATGCCATCCG CGTCGCCGCG CATCTGGCCG AACGCTTCAA AACAGGGGCC TGGGCGTGA
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Protein sequence | MIIIGSGAGG GTLARALAPS GLSILILERG DYLPREWGNW DPHTVFAEHR YHTPEQWHDG DGQIFTPVTG YHVGGNTKFY GAAVLRRREK DFLPRHHRDG LTPAWPIAYA DLAPHYDQAE AWYFTHGQAG ADPLEPPRGP FAFPPFPHEP LLAALEQKLR NMGLHPFPLP LALHRNEEDP AHSPCVRCPT CDGFPCLLHA KGDAEVCGVT PALAHANVRL LTRHRVLRLL PGGDGRGVEG VETDQGTLRA RVVVLAAGAV NSAALLLASA DAAAPQGLAN SSDQVGRNYM CHLNSACMAL KAAQENTTVF QKTLAINDFY DDSGDPDYPY PLGHIQNLGK VTPALLHAQQ PLLPIPLVAW TASHSVDWWL TTEDLPDAGN RVTLDSDGHI RLAWQPKNRE SHQRLCDQWR KILHQAGFPM VFFQAMDISA TAHQVGTCRF GEDPADSVLD PWCRAHDLAN LYVVDASFMP SISAVNPSLT IMANAIRVAA HLAERFKTGA WA
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