Gene AFE_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1328 
Symbol 
ID7134418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1147883 
End bp1149202 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content63% 
IMG OID643529724 
Producttransposase, IS605 OrfB family protein, putative 
Protein accessionYP_002425764 
Protein GI218667270 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCTGA GCACCACGGC GCTGTACCGG GCCTATTGCC GCGCGCTGAT CGGCGTGCTC 
TGGGTACATC AAAAGGAAAT CATCGCGGCA CCATTCCCTG TCGCCGTCGT CGAACGACTG
ATTCATGCGA CCGCGCGGAA CCCCAATCCC CAATACCACT ATTTCGACCG GCACTTTCCC
AAGTTCCCCA GCTACTTGCG CCGGGCGGCC ATCATGGCGG CGCTGGGTCA GGCGTCCTCG
TTCTCCACCC GCTATGATCA ATGGCAGGGT GGTATCCGTA AACGGCGCGA TGCCTTGCCG
CCGCGCCGGA CCGGGGAAAA CGCGCTGAAC CCCCCGTTGT ATCGTGGTCA GTGCATTCGT
TTCGATGAGC AGTACCAGCA TGCCGAAATC AAGGTCTGGT CCGGTACCGA CTGGATCTGG
ACCACCTTGC GGATCGCCGC CAAGCGGCAC CGGCACGAGG CACCGCAAAA CAAGGCGTTG
TCTCCGATGC TGCTTGCGGA CGGCAGCGGC GTCAAGCTCG CCATTCCTTT CGAAGTGCCT
GTGCAGTTTC CGTCCAGAAA GGCCGCGCAG CGCGTCTGCG GGGTCGATCT GGGCATTCGT
AAAACCGCCA CCGCATCCAT TGTCTCCGCA GACGGTACGG TCGTGGCCCG GCAGTTTTTC
CACCGGGGCG CGGACATCGA CCGTCGGGAC AAGGGGCTGG TGACGGTACG TTCCAAAGCC
CGTCTCACCA TGGGCAAAAG TGGCACACTC AGCAAGGGTT TTTGCAGGGC GGTCTATCGC
AAGGCCCGCC ACCGCAATCT GGACATGGCG CAACGCCTGT CCGGGGAAAT CGTGGCGTTC
GCCCAGGACC ATGGGGCGCA GGTCATCGTA TTGGAGCATC TCAAGCAGTA CCGGCCCCGA
GCCGGACGCA AGGGGTCCAC CCTCCGGCAG CGCTTCCACG GCTGGTTGCA TAGCCTGCTC
GCCCGGCGGA TACGGGAACG GGCCGAAGAA TCCGGATTGC TGGTCGAGTT CGTCAACCCG
GCCGGCACGT CGGAACATGC GTACGACGGC TCGGGTGCCG TCAAGCGCGA CGCCCGCAAC
TGGTCCTGGG TGACCTTCGC CACCGGCAAA CGCTACAACG CCGACTTAAA CGCCTGCTAC
AACATCGCCG CGCGGTTCTT TGCCAAGATG TTGGGGCTCA CGGGCAGAAA TGCCCAGGCG
TGTGTTCGCG GCAAAAGTTC CGCGACGCAA CCGAGAATCC CGGTCACGCT CTCTACGCTA
TGGCGGCACG CGCAAGCCAT GGCAACAGAG CATGAAGCCC CGACTACAGC ACCTGCTTAG
 
Protein sequence
MVLSTTALYR AYCRALIGVL WVHQKEIIAA PFPVAVVERL IHATARNPNP QYHYFDRHFP 
KFPSYLRRAA IMAALGQASS FSTRYDQWQG GIRKRRDALP PRRTGENALN PPLYRGQCIR
FDEQYQHAEI KVWSGTDWIW TTLRIAAKRH RHEAPQNKAL SPMLLADGSG VKLAIPFEVP
VQFPSRKAAQ RVCGVDLGIR KTATASIVSA DGTVVARQFF HRGADIDRRD KGLVTVRSKA
RLTMGKSGTL SKGFCRAVYR KARHRNLDMA QRLSGEIVAF AQDHGAQVIV LEHLKQYRPR
AGRKGSTLRQ RFHGWLHSLL ARRIRERAEE SGLLVEFVNP AGTSEHAYDG SGAVKRDARN
WSWVTFATGK RYNADLNACY NIAARFFAKM LGLTGRNAQA CVRGKSSATQ PRIPVTLSTL
WRHAQAMATE HEAPTTAPA