Gene AFE_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1227 
Symbol 
ID7134297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1080466 
End bp1081581 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content63% 
IMG OID643529623 
ProductSer/Thr protein phosphatase family protein 
Protein accessionYP_002425663 
Protein GI218667988 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTAC TACACACCGC AGACTGGCAA ATCGGCAGAA CCTATGCGTT CTTTGAGCCG 
GATGACGCCG CCGTGCTTTC CGAAGCTCGC ACCACCACCG TCGAACGCAT CGCCGCCCTG
GCCACGGAGG AGTGCGTGGA CCTGGTGGTG GTGGCCGGTG ACGTGTTCGA TGCACAGACC
GTGACCGACC GCACTATGCG CCGTCTTTTT CTTGCCATGC AGGGCTTTGC CGGGCCGTGG
TGCCTGCTCC CCGGCAACCA TGACGCGGCA CTTTCGGAGA GCGTGTGGAC GCGAGCCCGC
CGTCTGGGCC TGATCACTCC GAACATCCAT CTGCTGCTGA GTCCAGCCCC GATCCTCTTG
CCAGACCAGG GCGTGGCCAT CCTGCCCGCC CCGTTAACCC AGCGGCAGAC CAGCGACGAT
CTCAGCGCCG CTTTGGACGC CATGGAGACA CCACCTGGGC TCCTGCGTAT TGGGGTGGCG
CATGGAGCAG TTCAAGGCGT TCTGCCGGAA GGCATCGATT CCTCCAACCC CATTGCGCCA
GACCGCGCGG AAACCGCCCG GTTGGATTAT CTCGCGTTGG GTGACTGGCA TGGCTGCAAG
GAGATCAACG CCCGTACCTG GTACGCCGGC ACGCCGGAAC CGGAACGCTA TGTGGACAAT
GATCCGGGGC AGGTTCTGTT GGTCGAAATC GCCGCTCCCG GCATGGTTCC ACAGGTGACT
CGGCACCCGG TTGGCCAGTA CCAATGGGTA CGGTGGGAGC GGGAATTTCA AGTCGCAGAG
GACGTGGATG CCTTGGATGA ACGGCTTTCC ACTTTGGATA GCCGCTTCGT GGTGCGCCTG
GATCTGTCTG GAGTCCTGGA TATCACCGCC CGCCAGCGCT TGTTGGAGAA CCTGGCCGTC
GCATCTGCCC GGGTTCGGGC GTTGGAATAT GACCTGGCAG AGATCCGCTT GCAGCCCACG
GATGCTGACA TCGCGAACAT GCAGGCCGAT GGATACTTGT CCGACGTGAT TGGCGAGCTG
CGGGATCGCT CGGCCGTACC GGACCAGAAA GAGGTCGCCA CGGAAGCACT GGTCATCCTC
GCCGATATTT TGCAGAACCA ACAGGGGGCC GCGTGA
 
Protein sequence
MKLLHTADWQ IGRTYAFFEP DDAAVLSEAR TTTVERIAAL ATEECVDLVV VAGDVFDAQT 
VTDRTMRRLF LAMQGFAGPW CLLPGNHDAA LSESVWTRAR RLGLITPNIH LLLSPAPILL
PDQGVAILPA PLTQRQTSDD LSAALDAMET PPGLLRIGVA HGAVQGVLPE GIDSSNPIAP
DRAETARLDY LALGDWHGCK EINARTWYAG TPEPERYVDN DPGQVLLVEI AAPGMVPQVT
RHPVGQYQWV RWEREFQVAE DVDALDERLS TLDSRFVVRL DLSGVLDITA RQRLLENLAV
ASARVRALEY DLAEIRLQPT DADIANMQAD GYLSDVIGEL RDRSAVPDQK EVATEALVIL
ADILQNQQGA A