Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_15481 |
Symbol | truB |
ID | 4718274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 1327075 |
End bp | 1327998 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640079273 |
Product | putative tRNA pseudouridine 55 synthase |
Protein accession | YP_001009938 |
Protein GI | 123969080 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACTA AAGATGGATT CTTAGTAATT AATAAAGATA AAGGCTGTAC CTCTCATGAT TGTGTTAAAC AAATAAGGAA GTTACTAAAT ACAAAAAAGG TTGGGCACAC AGGAACTCTT GACCCAGAAG TTATAGGAAC ATTACCAATC GCTATAGGCA ATGCAACAAG ATTTATTCAA TATCTTCCCC AGGGTAAAAC CTATATAGGA GAAATTAAAT TAGGGATAAG AACTAGCACT GATGATATTC AAGGAGAAAT AATTAGTCAA AAAAGTTGGC CTAAAATCAG CTATAAACAA TTAGATCAAT ACTTCAATAG ATTTAGAGGA ATTATTAAAC AAATTCCGCC GAAAGTTTCT AGTGTGCACG TCAATGGAGA GAGAGCTTAT AAAAAATCTT TCAGGAATGA AATTTTTGAA TTAGCACCAA GAGAAGTAAA AATAGACGAA CTCATTTTAA TGAACTGGGA CCAAATTAAC GGAATCATAG AAATAAAAAT CAAATGTTCA GCTGGCACAT ATATAAGATC AATCGCGAGA GATATAGGAG AAACTCTTAA TTCCGCAGGT TGCCTTCTTC AACTAAAAAG AATTTCAGCT TGTGGCTTTG ATGAACAAAA CTCGATAAAA ATATCTGATA TTGAAAAAGA AAAAGGAAAA AAAAACTCGA AAAATTTTAT TATTCCAACA ATTTCTGCTC TTAGTCACAT TTCAACATTT GTCTTAAGTA ATGAAGAACA AATCAATTTT TGGCAAACAG GAAGAGAAAT TAAAGTTGAT ATTAATTACT TCCGGGAAAG CAAATCATTT GACTATAAAA AACCTATAAA AGTAATAGAT AACAAACAAA CACTTCTTGG GATAGGCTTC TTAAATAAAG AGCAATCTAA TATAAATCCA AAATTAGTCC TTAATGCTAA ATAA
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Protein sequence | METKDGFLVI NKDKGCTSHD CVKQIRKLLN TKKVGHTGTL DPEVIGTLPI AIGNATRFIQ YLPQGKTYIG EIKLGIRTST DDIQGEIISQ KSWPKISYKQ LDQYFNRFRG IIKQIPPKVS SVHVNGERAY KKSFRNEIFE LAPREVKIDE LILMNWDQIN GIIEIKIKCS AGTYIRSIAR DIGETLNSAG CLLQLKRISA CGFDEQNSIK ISDIEKEKGK KNSKNFIIPT ISALSHISTF VLSNEEQINF WQTGREIKVD INYFRESKSF DYKKPIKVID NKQTLLGIGF LNKEQSNINP KLVLNAK
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