| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_01331 |
|---|
| Symbol | crtQ |
|---|
| ID | 4716816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 126028 |
|---|
| End bp | 127482 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640077831 |
|---|
| Product | zeta-carotene desaturase |
|---|
| Protein accession | YP_001008528 |
|---|
| Protein GI | 123967670 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3349] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02732] carotene 7,8-desaturase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATTG CAATAGTTGG TTCTGGATTA GCTGGTCTTA CAGCAGCAGT CAATTTAGTT
GATGAAGGTC ACGAAGTAGA AATTTTCGAG AGCAGGTCAT TTTGGGGAGG TAAAGTAGGA
AGTTGGGAAG ATAAGGATGG TAACCACATA GAAATGGGCT TACATGTATT TTTTTATAAT
TATGCAAATC TTTTTAAATT AATGAACAAA GTGGGAGCTC TAGACAATTT ACTCCCGAAA
GACCATACTC ATCTATTTAT TAATAATGGT GGTAATTTAA AATCTTTAGA CTTCAGATTC
CCTTTAGGTG CTCCATTTAA TGGACTTAAA GCTTTTTTTA CCACCGAACA ACTAACTTGG
GTAGATAAGT TCAGGAATGC CTTAGCTTTA GGGACAAGCC CAATAGTTAG AGGATTGATA
GATTATGAAG GCGCAATGAA AATAATTAGA GATCTAGATA AAATTAGTTT TAAAGAATGG
TTTTTAAACC ATGGTGGAAG TGAAAAAAGC TTAGAAAGAA TGTGGGATCC TATCGCATAC
GCTTTAGGTT TTATTAATTG CAAAGATATT TCAGCAAGAT GCATGCTAAC TATATTTATG
ATGTTTGCTT CAAAAACAGA AGCCTCAAAA CTTAATCTTT TAAAAGGTTC TCCGCATAAG
TGGTTAACTC AACCTATTGT CGACTACATC ACAAACAAAG GCGCAAAAAT ACATCTTAAC
CATAAGGTAG AAGAAATCAT TTATGAAAAG GAATCTTCCT CTTATTCAGT AAATCAATTA
AAAATATCTT CTCCTGAAGG AATTAAGGCA GTGTTTGCAG ATAAATTTCT AGCTGCCTGT
GATGTTCCTG GAATAAAAAA AATAATTCCA AAAGAATGGT ATCAATTTAA AGAATTTGAA
GGTTTAAAAA AACTTAGAGC TGTAGCTGTA GCCACAATCC AATTAAGATA CGACGGTTGG
GTTACTGAAT TAGAAAAAGA TAATACTGGA AACGAACCAA TTGGACTAGA TAACCTTCTT
TATTCTGCTG ATGCCTCTTT CAGTTGTTTT GCTGATTTAG CACTAGCAAG TCCAGCAGAC
TATAGAAAAA AAGATATGGG ATCGCTTCTC CAATGTGTTT TAACTCCTGG CGATAGATGG
ATGGGAAGAT CCACAGAAAG AATTACAAAA GCAATAGATA AAGAGGTTCG CCGTCTATTC
CCATCCTCAA AAAACCTTAA ATTGCTTTGG AGTAACGTGG TACAAATTCC ACAATCACTC
TATAGAGAAG CTCCCGGTAT GGAACCTTTC AGACCCGATC AAAAAACATC TATATCTAAT
TTCTTCATGG CTGGTAGTTA TACAAAACAA GATTATATAG ACTCTATGGA GGGAGCTACA
ATGAGTGGTC ATTTAGCTGC CGCCGCAATT TTAGAGAAGA AAGCCGAATT AGCAAAAAAT
CTTGCAGTAA GTTAA
|
|---|
| Protein sequence | MKIAIVGSGL AGLTAAVNLV DEGHEVEIFE SRSFWGGKVG SWEDKDGNHI EMGLHVFFYN
YANLFKLMNK VGALDNLLPK DHTHLFINNG GNLKSLDFRF PLGAPFNGLK AFFTTEQLTW
VDKFRNALAL GTSPIVRGLI DYEGAMKIIR DLDKISFKEW FLNHGGSEKS LERMWDPIAY
ALGFINCKDI SARCMLTIFM MFASKTEASK LNLLKGSPHK WLTQPIVDYI TNKGAKIHLN
HKVEEIIYEK ESSSYSVNQL KISSPEGIKA VFADKFLAAC DVPGIKKIIP KEWYQFKEFE
GLKKLRAVAV ATIQLRYDGW VTELEKDNTG NEPIGLDNLL YSADASFSCF ADLALASPAD
YRKKDMGSLL QCVLTPGDRW MGRSTERITK AIDKEVRRLF PSSKNLKLLW SNVVQIPQSL
YREAPGMEPF RPDQKTSISN FFMAGSYTKQ DYIDSMEGAT MSGHLAAAAI LEKKAELAKN
LAVS
|
|---|
| |