Gene A9601_00041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_00041 
Symbol 
ID4716686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp5882 
End bp8323 
Gene Length2442 bp 
Protein Length813 aa 
Translation table11 
GC content27% 
IMG OID640077701 
ProductDNA gyrase/topoisomerase IV, subunit A 
Protein accessionYP_001008399 
Protein GI123967541 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA AAAATTTCAC TTCCATATCA CTTCAAGAAG AAATGCAACG TTCTTATTTG 
GAGTATGCAA TGAGCGTAAT AGTTGGACGT GCTTTGCCTG ATGCAAGAGA CGGTCTTAAA
CCTGTACAAA GAAGAATCAT ATTTGCAATG TACGAATTAG GTTTAACTCC TGATAAACCA
TTTAGGAAGT GTGCAAGAGT TGTTGGAGAT GTACTTGGAA AGTACCATCC TCACGGAGAT
CAAGCGGTAT ATGATGCATT AGTAAAACTA GTACAAAATT TTTCAACTAA GTATCCTACT
CTTGACGGTC ATGGAAATTT TGGATCTATC GATAATGATC CGCCGGCAGC AATGAGATAT
ACTGAGACCA GATTAGCTCC AATAGCTCAT AAAGGATTTC TTGAAGAAAT TGGATCAGAA
ACAGTAAACT TTTCAAATAA CTTTGACGGT TCTCAAAAAG AACCAGATGT TCTTCCAGCC
CAACTTCCAT TTTTATTATT GAACGGCTCA ACAGGTATTG CTGTTGGCAT GGCAACAAAT
ATTCCGCCTC ACAACCTAGG TGAAATTGTT GATGGCTTAG TTACCTTAGT TAAAAATAAA
GATATTAGTG ATAAAAAACT TTTTAACATT ATCAAAGGAC CTGATTTTCC TACAGGAGGA
GAATTAATTT ATAGTCGTGC AATAGAAGAA CTTTATCAAA CTGGAAAAGG ATCCATAACG
ATAAGAGGGG TTATAAATAC GGAAGAGGTA AATTTGGGCA AAGGGAAACA TAAAAAGAAT
GCAATAATCA TTAAGGAACT TCCTTACCAA ATTAATAAAG CAGGTTGGAT TGAAAAACTC
GCAGAACTTG TAAATGCAGG CAAAATTATT GGAATTTCTG ATATTAGGGA TGAAAGCGAC
AGAGATGGAA TGAGAATTGT AATAGAACTA AAAAAAGATT CTAATTCTGA ACTTGTTATT
TCTAATTTAT ATAAAAAAAC AACTCTACAA ACAAACTTTG GCGCAATATT CTTAGCTTTA
ATTAAAGGGA AGCCTGTACA ACTAAATCTT AAAAAATATC TTAACTATTT TCTTGAATTT
AGAGAAGAAA CAATTAGAAA AAGAACTTTT TATTTTCTAA AAAACACCCT TGATAAACTA
GAAATATCAG AAGGTTTATC TAAAGCTACA AAAGACATAA AAAAAGTTAT CGCAATTATT
GAAGAATCAG AAAATTCTGT GCAGGCTAGA TCAAAATTAG TAGAAAAATT TTTTTTAAGT
GAAAAACAGG CAAATTCAGT TTTAGATATG CCACTAAAAA AATTAACAAA TCTAGAAAAA
AATCAAATTG ATAATGAAAT AAAAAATTTA GCAGAAAAAA AGAATTATTT TCAAAAATTA
TTGAACGAAA GAGAATTATT ACTTAAATTA CTCATAGAAG AATTATTAAT ATTAAAGAAA
AAATATAATG TTATACGTAA AACAAAAATA ATTAAAAATT TAAATCAAAA TGAAGAATTA
GAAACTCTTA ATAATCAGAT ATTAGAAGAC TTTATAAATA AAAAAACAAA ATTATACATA
GACAATAGAC TTTATTTAAA AAGGATGATT TTAAGTAATT ACAAGAAATC ATTTGAGGGT
GTAAATAAAA TTATAGATAA TAAAAATATT CAAAAATTTA TATGTAATAT TGAAAAAAAT
ACAAAATTAA TAGGAATCAC AAATACGGGA AGAGTATTTA ACATTGATTG GGAATCAAGT
ATTAATAAAG ACTATAAATT AGATAATAAA ATTCTTGGAA ATATTCATCC AAGTGAAATA
ATAAATTTTC ATTCAATTAA AAAAGAAACT AGAAATTATT TATGCATATT AAATTCGGAT
GGAAGATTTA AAAAAGTTTT ATTTGATAAA GATATGATTA AAAGCAATAG ATCTTTCACT
ATTACAAAAT TAAAAAATAA TTTAAAAACA GTTGATTCTT TTATTTCTAA TGAAAGCAAA
AATTTAATAA TATTAACCTC AATAGGAAGA ATTTTTAAAT TTAATTTATC AAATAAATTT
CTAACGGCAA CTTCTAAACA ATCCAAAGGA TTAATAATTG CAAAGCTTTT ACCAACTGAA
AAAATCGTTT CCTGTTGTAC ATTTCATGAT GGAGAAAATA TTTTTTTAAT TTCTAAACAA
GGAAAAATCT TCTGCATAAA TAGTAATGAA ATTTACTGCT CAAATGAATA CAGTTTGGGA
TATTTGAACG AAAAAACCCA ACTTAAAAAC GATTACTTCC TAAAAATAAT GGCAAGCAAC
CATTACCTTG ATATTGAAAC TAATAAAAAT AAATCTGCAA GATTAGACTT AAATAAAATA
AATTTCAAAT CCAATAAATC AAACTTTTTA ATTGATTTTT TAAAAATAGA TAATGATGAA
TACCTTGAAA ATTGTTTCCG ACTTGAAAAC TTTCTCAACT AA
 
Protein sequence
MDKKNFTSIS LQEEMQRSYL EYAMSVIVGR ALPDARDGLK PVQRRIIFAM YELGLTPDKP 
FRKCARVVGD VLGKYHPHGD QAVYDALVKL VQNFSTKYPT LDGHGNFGSI DNDPPAAMRY
TETRLAPIAH KGFLEEIGSE TVNFSNNFDG SQKEPDVLPA QLPFLLLNGS TGIAVGMATN
IPPHNLGEIV DGLVTLVKNK DISDKKLFNI IKGPDFPTGG ELIYSRAIEE LYQTGKGSIT
IRGVINTEEV NLGKGKHKKN AIIIKELPYQ INKAGWIEKL AELVNAGKII GISDIRDESD
RDGMRIVIEL KKDSNSELVI SNLYKKTTLQ TNFGAIFLAL IKGKPVQLNL KKYLNYFLEF
REETIRKRTF YFLKNTLDKL EISEGLSKAT KDIKKVIAII EESENSVQAR SKLVEKFFLS
EKQANSVLDM PLKKLTNLEK NQIDNEIKNL AEKKNYFQKL LNERELLLKL LIEELLILKK
KYNVIRKTKI IKNLNQNEEL ETLNNQILED FINKKTKLYI DNRLYLKRMI LSNYKKSFEG
VNKIIDNKNI QKFICNIEKN TKLIGITNTG RVFNIDWESS INKDYKLDNK ILGNIHPSEI
INFHSIKKET RNYLCILNSD GRFKKVLFDK DMIKSNRSFT ITKLKNNLKT VDSFISNESK
NLIILTSIGR IFKFNLSNKF LTATSKQSKG LIIAKLLPTE KIVSCCTFHD GENIFLISKQ
GKIFCINSNE IYCSNEYSLG YLNEKTQLKN DYFLKIMASN HYLDIETNKN KSARLDLNKI
NFKSNKSNFL IDFLKIDNDE YLENCFRLEN FLN