| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4081 |
|---|
| Symbol | |
|---|
| ID | 7297506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4562615 |
|---|
| End bp | 4563328 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643596888 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002494465 |
|---|
| Protein GI | 220919161 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCG TCGCGGTGCA GGGCGTCTCG AAGGACTACA TGCTCGGCAA GACGGTGGTG
CCGGCGCTCC GGGACGTGAC GCTCGAGATC GGGCGGGGCG AGTTCCTGTC CATCGCCGGG
CCGTCGGGCA GCGGGAAGAC GACCCTGCTC AACCTCATCG GCTGCGTGGA CACGCCCACG
ACCGGCGTCG TGCAGGTGGA CGGGAAGGAC ACCTCGCGCC TCAGCGAGCG GCAGCTCACC
GACCTCCGCC TGCGCACCAT CGGCTTCATC TTCCAGAGCT TCAACCTGGT CCAGGTCCTG
TCGGTGTTCC AGAACGTGGA GTTCCCGCTG CTGCTCCAGG GCGGGCTCTC GCGGCGGGAC
CGCGAGGCGC GCGTCCTGGG GCTGCTCGAG GCGGTGGGCC TCGCCAGCCA CGCCCGGCAC
CGTCCCAGCG AGCTGTCCGG CGGCCAGCGC CAGCGCGTCG CGGTGGCCCG CGCGCTCGTG
ACCGCGCCGT CGCTGGTGCT CGCGGACGAG CCCACCGCCA ACCTCGACTC GGCCACCGGC
GAGAACATCA TCGACCTCAT GAAGGAGATG AACGCGCGCG ACGGCACCAC GTTCGTCTTC
TCCACCCACG ATCCCAAGGT GATGGCGCAC GCCAGCGCGG TGATCCGCAT CGCCGACGGG
CGCATCGTGG GCCGCGAGGC GGGGCAGGGC GCGGCGGCGG AGGCGGCGCG GTGA
|
|---|
| Protein sequence | MSIVAVQGVS KDYMLGKTVV PALRDVTLEI GRGEFLSIAG PSGSGKTTLL NLIGCVDTPT
TGVVQVDGKD TSRLSERQLT DLRLRTIGFI FQSFNLVQVL SVFQNVEFPL LLQGGLSRRD
REARVLGLLE AVGLASHARH RPSELSGGQR QRVAVARALV TAPSLVLADE PTANLDSATG
ENIIDLMKEM NARDGTTFVF STHDPKVMAH ASAVIRIADG RIVGREAGQG AAAEAAR
|
|---|
| |