Gene A2cp1_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3399 
Symbol 
ID7297413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3788397 
End bp3789128 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID643596206 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002493797 
Protein GI220918493 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGCA TCTTCATCAC AGGGTCGGCG GACGGGCTGG GCAAGGCCGC AGCCGAGACG 
CTTGTCGCCG GCGGTCACGA GGTGATCGTC CACGTGCGCA CCGAGCAGCG GCTCGGGGCG
GTGCAGGAGC TCGTCGCACG AGGTGCGACG GCCCTGGTCG GCGATCTCGC CGACCTGGAG
CAGACCCGCG CGCTCGCAAG GCAGACCAGC ACGCTCGGGC GCATGGACGC CGTGATCCAC
AACGCGGGCG TCTACTCCGG CCCTTCGGTC CTTCCAGTGA ACGCGGTCGC GCCCTACGTG
CTCACGGCGC TCATGCCGCG CCCGGAACGC CTGATCTACC TGAGCAGCGG GATGCACCAC
GGCGGCCGAC CGCGGCTCGA AGGCCTGGAC TGGAGCGGGC GGCGTGCCAC CGGGTCCTAT
TCGGACAGCA AGCTCTTCGT GACCGCGCTC GCCGCCGCCG TCGCGCGGCT GTGGCCGGAC
GTCGTCAGCA ACGCGGTGGA TCCGGGGTGG GTGCCCACTC GGATGGGCGG TCCCAACGCG
CCGGACGATC TCCGCCTCGG GCACGCCACT CAGGAGTGGC TCGCGACCAG CGACGCTCGC
GAGGCGCGCA CCAGCGGCGG CTACTGGCAC CATCGACGGC AGGTCGCGCC GCACCCCGCG
GTGCACGACG TGAAGTTCCA GGCCCGGCTT CTAGGAGAGC TGGCTCGGGT CACCGGCGTG
ACGCTGGAAT GA
 
Protein sequence
MARIFITGSA DGLGKAAAET LVAGGHEVIV HVRTEQRLGA VQELVARGAT ALVGDLADLE 
QTRALARQTS TLGRMDAVIH NAGVYSGPSV LPVNAVAPYV LTALMPRPER LIYLSSGMHH
GGRPRLEGLD WSGRRATGSY SDSKLFVTAL AAAVARLWPD VVSNAVDPGW VPTRMGGPNA
PDDLRLGHAT QEWLATSDAR EARTSGGYWH HRRQVAPHPA VHDVKFQARL LGELARVTGV
TLE