| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2300 |
|---|
| Symbol | |
|---|
| ID | 7299266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 2549805 |
|---|
| End bp | 2551346 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643595096 |
|---|
| Product | Sigma 54 interacting domain protein |
|---|
| Protein accession | YP_002492704 |
|---|
| Protein GI | 220917400 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.535149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCGAG ACGAGTCGCC GGACGCGCGC ATCGCGCGGG AGCTGCGGCG GGTGGAGCAG
GGCGGCGCGG CGAAGTACCA CGCCAAGAAC GCCGAGCAGG GCAAGCGCTT CGCGCGGGAG
CGGATCGCGC TCCTGCTCGA CCCGGGGAGC TTCGTCGAGG ACGGCGCGCT CGCGAACGCG
CTCGACCCGG AGCTGCCCGC CGACGGCGTC GTCACCGGCA TGGGCCGGAT GGACGGCCGC
CCGGTGTGCG TCATGGCGAA CGACTCCACC GTGAAGGCGG GGAGCTGGGG CGCGCGCACG
GTCGAGAAGA TCCTGCGCAT CCAGGAGGTC GCGGCGGCGC AGCGCCTGCC GCTGCTCTAC
CTGGTGGACT CGGCCGGCGC GCGCATCACC GACCAGGTGG AGATGTTCCC GGGGCGCCGC
GGCGCCGGGC GCATCTTCCA CAACGAGGTG CACCTCTCCG GCGTGGTCCC CCAGATCTGC
CTGCTGTTCG GTCCGTCGGC GGCGGGCGGC GCGTACATCC CGGCGTTCTG CGACGTGGTC
GTGATGGTGG AGGGGAACGC CTCCATGTAC CTGGGCTCCC CGCGGATGGC CGAGATGGTC
ATCGGCGAGA AGGTGACGCT GGAGGAGCTG GGCGGCGCGC GCATGCACTG CTCGGTGTCC
GGCTGCGGCG ACTTCCTGGT GAAGACCGAG GAGGAGGCCA TCGCGCTGGC GCGCCGCTGG
CTCTCGTACC TGCCCTCCAG CCACCGTGGC CTGCCGCCCG AGGCGCCGGC CCGGCCGCCG
CGCCCCGGCG CCCGCGCGCC CGCCGACGTG GTGCCGCGCG ACCAGAACAA GCCGTTCGAC
ATGCTCGAGC TCGTCGACGC GATCGTGGAC GAGGGCTCGT TCCTGGAGGT GAAGCGCCTC
TGGGCCGGCG AGCTCGTCAC CGGGCTCGCC CGCATCGACG GCCAGGTGGT GGGGATCGTC
GCGAACCAGC CCAAGGTGAA GGGCGGGGTG CTGTTCGTGG ACTCCGCCGA CAAGGCCACC
CGCTTCATCT GGCTGTGCGA CGCGTTCAAC GTGCCGCTGC TCTACCTCGC CGACGTGCCC
GGGTTCATGA TCGGCACGAA GGTCGAGCGG GCCGGGATCA TCCGGGCGGG GGCCAAGATG
ATCAGCGCGG TCTCGGAGGC CACCGTCCCG CGCATCTGCG TGGTGGTGCG CAAGGCGTAC
GGCGCCGGCC TCTACGCGAT GGACGGCCCG GCGTTCGGCC CGTCCGCCAC GCTGGCGCTG
CCGGAGGCCA TGATCGCGGT GATGGGGCCG GAGGCGGCGG TGAACGCGGT CTTCTTCAAC
AAGATCCAGG AGCGACCCGA GGCCGAGCGG GCCGCCTACG TACAGGCCCT GCGCGAGGAG
TACCGGGCCG ACATCGACCT GCTCAAGCTG GCGAGCGAGC TGGTGGTGGA CGCGGTGGTG
CCCGGCGAGC GGCTGCGCGA GGAGCTCTCC CGCCGGTTCC GGATCTACGC GGCCGGCCAC
GAGCCGACCC GCGAGCGCAA GCGCGGCGTC CTCCCGGTCT AG
|
|---|
| Protein sequence | MARDESPDAR IARELRRVEQ GGAAKYHAKN AEQGKRFARE RIALLLDPGS FVEDGALANA
LDPELPADGV VTGMGRMDGR PVCVMANDST VKAGSWGART VEKILRIQEV AAAQRLPLLY
LVDSAGARIT DQVEMFPGRR GAGRIFHNEV HLSGVVPQIC LLFGPSAAGG AYIPAFCDVV
VMVEGNASMY LGSPRMAEMV IGEKVTLEEL GGARMHCSVS GCGDFLVKTE EEAIALARRW
LSYLPSSHRG LPPEAPARPP RPGARAPADV VPRDQNKPFD MLELVDAIVD EGSFLEVKRL
WAGELVTGLA RIDGQVVGIV ANQPKVKGGV LFVDSADKAT RFIWLCDAFN VPLLYLADVP
GFMIGTKVER AGIIRAGAKM ISAVSEATVP RICVVVRKAY GAGLYAMDGP AFGPSATLAL
PEAMIAVMGP EAAVNAVFFN KIQERPEAER AAYVQALREE YRADIDLLKL ASELVVDAVV
PGERLREELS RRFRIYAAGH EPTRERKRGV LPV
|
|---|
| |