| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0758 |
|---|
| Symbol | |
|---|
| ID | 7299143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 849021 |
|---|
| End bp | 851429 |
|---|
| Gene Length | 2409 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643593552 |
|---|
| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
|---|
| Protein accession | YP_002491178 |
|---|
| Protein GI | 220915874 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCA AGCTCCGAAG CATTCTGGAT ACATTGGCCG GGCTCACCCG GCCGAAAAAC
GTTACGAAAG AGCACCACCG GGCCGCCGAG CCGTCGAAGG AGCCGAAGCC GATGACCACG
AAGGGCCACG CCGCGAAGAA GCACGTGAAG AAGGCAGCGC CGAAGCAGAA GGCGAAGGCC
GGCGGCCGCA AGGAAGAGCG CCAGGCCAAG CCCGCGCCCA GGGCGCCTGC GCGCGCGGTG
GCGAAGCCGC CGGTCAAGCG CGCCAAGGCC GAGCGCGAGA AGCCGGAGAA GGTCGAGAAG
CCCGAGAAGG CCGAGCGGCA CGAGAAGGCC GGCGAGAAGC CCGAGAAGGC CCGCAAGAAG
GCGCCCGAGG CTGCGGCCGC CGAGCCCGCC CGCCCGGCGG GTCGCCCCGG CAAGCACCGT
CGCCCCACCG ACGAGGCCGA GCCCGAGACC GAGCGCGCCG AGGCGGACGC CGACGACGAC
GACGACGACG AGCTCGACGA GCTCCCGCAG GACGACATGA GCGACATCAC CGAGCGGTCC
GAGGTGAAGG AGCTCATGGC GCGCGGGCGC GAGAAGGGCT TCCTCACCTA CGACGAGGTG
AACGACGCGC TGCCCTCGGA CATCGGCTCG GACCAGATCG ACGACGTCAT GTCGATGTTC
GGCGAGCACG ACATCGAGGT CGTGGACGGC GCCGAGAAGA AGATGAAGCT CCCGGACAAG
CCGCCCGAGC CCGAGGCCAA GGCGGACGCC GAGGAGGAGA AGGAGGAGGA GGACGACGCC
GGCTACGGCA AGTCCAACGA CCCGGTGCGC ATGTACCTGC GCAAGATGGG GTCCGTCTCC
CTCCTCACGC GCGAGGGCGA GGTGGAGATC GCGAAGCGCA TCGAGGAGGG CGAGAAGGAG
ATCCTCGGCG CGGTGCTCTC GTCGTCGATC GCCATCCGCG AGATCCTCGA GCTGGGCGAG
CGGCTCCGCA AGGGCAAGAT CCGCGTCCGC GAGATCATCA AGGACGCCGG CGACGAGCAG
CAGGCCGAGG CGGAGGAGCC CGAGGAGGAG CTGGACGAGG CCGCCGAGGC GCCGGAGGGT
CAGGGCGACG CCGAGGCCGA GGCCGGCGAC GGCGCCGCGC CGGCCGAGGG CGCCGAGCCG
GAGAAGCCCC GCATCCCGAA GGAGGAGGAG CGCAAGGTCG AGCACGTGCT GAAGCACATC
GACCGGATCC GCAAGCTGGA GCGCGACGTC GCGAAGGTCC GCGAGACGCT CCAGGGCGGC
AAGAAGCTCT CCGAGGTGAA GCGCAAAGAG CTGAAGGGCG AGATCCGCGC CATCGAGGCG
GAGATGATGG AGAACCTCGA GGCGATCCAG CTCAACAAGA AGCAGATCGA CCGGATCGTC
CTGCGCCTGA AGAGCTTCAT CAAGCGCGTG GAGGAGGCGG AGCGCGAGTT CTTCGACTGC
GAGCGCCGCA CCGGCGTGCC GGTGAAGGAC CTGCGGCGCC TGCTCCGCGA GACGCGCGAG
GACGAGGCCG AGCGGAAGAA GCTCGCGAAG AAGCTCCGCT GCGCGCTCGA CGAGGTGGAG
GAGCTGGACC GCACGCTGCG CTCGGCCGGC CGCAAGATCC TGCGCGTGCA GGAGGAGGCG
GAGGTGCCGG TGGAGGAGCT GCGCCGGACC TACCGCATGA TCGGCGACGG CGAGCGGAAG
GCGGAGCGCG CCAAGACCGA GCTGGTCGAG GCGAACCTGC GCCTGGTGGT CTCGATCGCG
AAGAAGTACA CGAACCGCGG CCTGCAGTTC CTCGACCTGA TCCAGGAGGG GAACATCGGC
CTGATGAAGG CGGTCGACAA GTTCGAGTAC AAGCGCGGCT ACAAGTTCTC GACCTACGCC
ACCTGGTGGA TCCGCCAGGC GATCACGCGC GCCATCGCGG ACCAGGCGCG GACCATCCGC
ATCCCGGTCC ACATGATCGA GACCATCAAC AAGCTCATCC GCACCAGCCG CTACCTGGTG
CAGGAGCTGG GGCGCGAGCC GACGCCGGAG GAGATCGCCG AGAAGATGGA GCTCCCGCTC
GACAAGGTCC GCAAGGTCCT GAAGATCGCG AAGGAGCCCA TCTCGCTCGA GACGCCCATC
GGCGAGGAGG AGGACAGCCA CCTCGGGGAC TTCATCGAGG ACAAGTCGCT GGTCTCCCCG
TCGGACGCGG TCATCAACAT GAACCTGGCC GAGCAGACCA GGAAGGTGCT CGCCACGCTG
ACCCCGCGCG AGGAGAAGGT GCTCCGCATG CGGTTCGGCA TCGGCGAGAA GAGCGATCAC
ACGCTCGAGG AGGTCGGCCA GGACTTCGAG GTCACACGCG AGCGCATCCG CCAGATCGAG
GCGAAGGCGC TGCGGAAGCT GCGCCACCCG TCGCGGTCGA AGCGGCTCAA GAGCTTCGTG
GAGAGCTGA
|
|---|
| Protein sequence | MKGKLRSILD TLAGLTRPKN VTKEHHRAAE PSKEPKPMTT KGHAAKKHVK KAAPKQKAKA
GGRKEERQAK PAPRAPARAV AKPPVKRAKA EREKPEKVEK PEKAERHEKA GEKPEKARKK
APEAAAAEPA RPAGRPGKHR RPTDEAEPET ERAEADADDD DDDELDELPQ DDMSDITERS
EVKELMARGR EKGFLTYDEV NDALPSDIGS DQIDDVMSMF GEHDIEVVDG AEKKMKLPDK
PPEPEAKADA EEEKEEEDDA GYGKSNDPVR MYLRKMGSVS LLTREGEVEI AKRIEEGEKE
ILGAVLSSSI AIREILELGE RLRKGKIRVR EIIKDAGDEQ QAEAEEPEEE LDEAAEAPEG
QGDAEAEAGD GAAPAEGAEP EKPRIPKEEE RKVEHVLKHI DRIRKLERDV AKVRETLQGG
KKLSEVKRKE LKGEIRAIEA EMMENLEAIQ LNKKQIDRIV LRLKSFIKRV EEAEREFFDC
ERRTGVPVKD LRRLLRETRE DEAERKKLAK KLRCALDEVE ELDRTLRSAG RKILRVQEEA
EVPVEELRRT YRMIGDGERK AERAKTELVE ANLRLVVSIA KKYTNRGLQF LDLIQEGNIG
LMKAVDKFEY KRGYKFSTYA TWWIRQAITR AIADQARTIR IPVHMIETIN KLIRTSRYLV
QELGREPTPE EIAEKMELPL DKVRKVLKIA KEPISLETPI GEEEDSHLGD FIEDKSLVSP
SDAVINMNLA EQTRKVLATL TPREEKVLRM RFGIGEKSDH TLEEVGQDFE VTRERIRQIE
AKALRKLRHP SRSKRLKSFV ES
|
|---|
| |