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10 Unclonable genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Tbd_0405  CDS  NC_007404  437647  438291  +  645  50S ribosomal protein L3P  YP_314163  unclonable  0.0000000000324929  normal  0.15101  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_0858  CDS  NC_007404  906765  910190  +  3426  DNA polymerase III, alpha subunit  YP_314616  unclonable  0.0000342881  normal  0.701952  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2181  CDS  NC_007404  2264206  2264799  -  594  hypothetical protein  YP_315939  decreased coverage  0.000000000487122  unclonable  0.000000213421  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2182  CDS  NC_007404  2265058  2266302  +  1245  putative dioxygenase related to 2-nitropropane dioxygenase  YP_315940  hitchhiker  0.000148707  unclonable  0.000000279866  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2183  CDS  NC_007404  2266331  2266783  -  453  hypothetical protein  YP_315941  normal  0.688747  unclonable  0.000000231276  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2184  CDS  NC_007404  2266794  2267243  -  450  6-pyruvoyl tetrahydrobiopterin synthase  YP_315942  normal  0.452775  unclonable  0.000000238403  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2185  CDS  NC_007404  2267257  2268150  -  894  hypothetical protein  YP_315943  normal  1  unclonable  0.000000288489  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2186  CDS  NC_007404  2268158  2269159  -  1002  putative protease  YP_315944  normal  1  unclonable  0.000000352606  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_2187  CDS  NC_007404  2269149  2270099  -  951  hypothetical protein  YP_315945  normal  1  unclonable  0.000000345504  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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Tbd_R0009  rRNA  NC_007404  478097  479599  +  1503  16S ribosomal RNA    unclonable  0.00000000257641  normal  1  Thiobacillus denitrificans ATCC 25259  Bacteria 
 
 
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