9 homologs were found in PanDaTox collection
for query gene Ppro_3501 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_3501  putative lipoprotein  100 
 
 
342 aa  699    Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.00000000161066  n/a   
 
 
-
 
NC_010814  Glov_3477  lipoprotein, putative  53.52 
 
 
284 aa  306  3e-82  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000364292  n/a   
 
 
-
 
NC_009483  Gura_0883  hypothetical protein  47.87 
 
 
284 aa  276  4e-73  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000316813  n/a   
 
 
-
 
NC_002939  GSU3314  putative lipoprotein  43.44 
 
 
338 aa  258  8e-68  Geobacter sulfurreducens PCA  Bacteria  normal  0.358873  n/a   
 
 
-
 
NC_012918  GM21_3461  hypothetical protein  42.76 
 
 
342 aa  253  3e-66  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3398  hypothetical protein  43.22 
 
 
336 aa  251  1e-65  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0143  putative lipoprotein  45.88 
 
 
341 aa  249  5e-65  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2696  hypothetical protein  30.38 
 
 
266 aa  139  7.999999999999999e-32  Pelobacter carbinolicus DSM 2380  Bacteria  unclonable  2.3240399999999997e-21  n/a   
 
 
-
 
NC_011684  PHATRDRAFT_48282  predicted protein  28.71 
 
 
1567 aa  44.3  0.003  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>