Gene PHATRDRAFT_48282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48282 
Symbol 
ID7203379 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp719534 
End bp725803 
Gene Length6270 bp 
Protein Length1567 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182749 
Protein GI219124937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATGT TTGCATCGAC CACTCGCAGA CATCACGCTT CTCTGACCAG TGTTCTTTGC 
TTGCTGGTCT TGACAGTTCC TCTTTTTGCG CAGACAACGC CGCAACGTCA AATTGTGTCA
GAACTCTCGC TCTGCGTGGA GGTGGCTGGA GCGAGCCAAG ACGACGGGGC CTCCATATTT
CAAGGGGATT GTAATGACGG AAACAAGCAT CAAGTCTTCG ACTTCATTCC TGCTCCCGGT
ACAGACAGCG GTTTTCATCG AATTCGAGCC TCGCACTCCA ACAAGTGCCT TGGCGTGGCT
GATGGGGCTT TAGCACCTGG AGCTGAGGTA GTGCAACTGT CTTGTGTCGA CAACAATCCC
AGTACGCTGT GGAAACAACG TGATGGGGCA TTGATCTTGC AACACTCTGG TTATTGTTTG
AGCGTCGATG TCAGTTCGCG TTCCACATCA GGGGCCTTTA TGGTGCAATG GTTTTGCGAC
AGTCCCAGCG TCAAGTGGCA AGTTAAGAGT GTGTCCGAGC AACATGACGG ACTACAGCAA
CTTTCTAAAC GCGGCAATTC TGTGGGAAAG TCTCAATCCG GATTCTATCT CAGTACGGGA
ACGCCCCACG ACAACCAGTT TCTTAGTACG AATTCATCCT GGACGGAGAC AGAAACCAAC
GGCGCAACAT ATTCGGGATG CGGTAGCTAT GGGCAAGACA CATTTAACCG TCATCGCACT
GGGCCTTCCT TTGTATTTAC GATACCAGGG TTCGTTGCGG GCGATACGTA CGACGTAACA
ATGGGTTTCG CCGAGATTTG GGCCCCGCAA TGTGAAGACG GAAAGCGAAT TATGGATATA
GCAGTCAATG GCAGAAGCTT TGCGCATGAC TTGGATGTAT ACAATGCCGC TGGTGGGTGC
CATGCTGCTT TGATTCTGAC CAAGTCGTTC GAGGCCAATA GCAGAGGAGA CTTTGTCATC
GATTTTTCAA GTACGATTCA CAACCCAATT GTTTCATTCA TTCAGATACA ACATGTTGGA
GCAAAGGGTA TACAAGCCCG AATGCTAGCG GATGTACCTA CGGCTTCGCC AAAGCTCAGC
ACCGAGCCCA GGATTGCGCG AGCAATAGAT GTCTCCACCA TTGTATCAGA GGGATTGAGT
GGTCTCTGCG TTGATATAAT TGACGGCAGT GAAATGGATG GTGCTCAGGC TATCCAGGCG
TCTTGCAACG GAGGTGCCAG TCAGGAATAT CAATTCTTGA TTGTTGGGGA GGGTCAGTTT
CAAGTTGTGG CCTCTCATTC ACAAAAGTGT TTGGGTGTCG CCGACTTCGA TGTGACTGAG
AGCGCCAATA TCATTCAACT ACCGTGTACA AACAACACCC TTTGGTACGT TGTTGGCGAT
AGCGCATACC TGCAACTTCG CGTTCTCCAC AGTGCCAAAT GCTTGAGTAT TTTCGGAGCT
TCGATTGCTT CGGGTGCGAA GCTTGTTCAG AAAGCCTGCA ATGAAGGCCT CGATCAGCGC
TGGAGTGTCG CTGACGGCTT GTTTGTAGTG GAGACGCTGA AGCCTTCAAC GTCAGCAGCT
CCAAGCCCGA GTCCCAGTGT GAGCTTTGAG CCAACGAGAG CGGGAGCGGG AAAGGGCCCC
CCTGCTCCGA CAATTCAACC AATTGACGTT CCAAGTAGTA TGCCTGCCTT ACGCGGATCC
AGGTCACCCT CGCGGCGACC TTCGCAAGCC GTAGGTGTTT CACCGGGGCC ACCGCTGTTC
TATCTCAATA CTGGAACTGA TCAAGACCTT GAATATATCT CTGGTGGTGC CGTTGGTGTC
TATTCCAAAC CTGGGGCTCA GATTTTCGAA GCTGGAAGTT ACGGAGAGGA GACATTCAGG
AGTCACCGAT GGGGAGAAAC GTTCGTGATT ACTATCCCTG GACTCAGTGG CGGCGAGATG
TATACCATAT CACTCGGCTT TGCTGAGATC TTCTTTTGTG ACGAAGGTCA GCGTATTATG
ACCATTACTG TAAACGACGA GGTTTTGGAG GCCGACTTGG ATGTGGTTGC TACCACTGGT
GCGTGTAATA CTGCTCTCGT GCTGAGGGAA GATTTTGCAG CAAATAGTGA TGGTGCATTT
GTCGTTGCTT TTTCCAGCCT TGTCGACAAC GCAATGGTTT CGTTCGTCGA GATTCATTTG
GCGGGGACAT TGTCACCATC CTTTTCTCCA GCTCCTGGCT TTGTACCGAG TTCAAGTGCA
GAACCTACCG TAGCTCCGGA GCCAAATCCG TGGGAAGGTG AGTACGCCAT GTCTCTGGTA
GCTGTAGCTG CTGCAAATCT GGACGACGGA AGAATTCTGG CTTGGTCCGC GTGGAGTAGG
ACCGACTATG CCCGTAGTGT CGGAAAAACT TTCATTTCCA TTTTCGATCC TTCCACCAAT
GAGAGTACTG AGGGAGAAAT CACAAACACG AATCACGATA TGTTTTGCCC CGGGACTGCT
ACGTTAGGCG ACGGTCGAAT TATGATTACC GGAGGGTCTA GTGCAGCGTC CGTTACATTT
TTCGACCCCT CCGCTAATAA CTGGTACAGA GGACCACCTA TGAATATTCC TCGGGGCTAC
CATTCGATGA CTGTGCTAGG GGATGGATCG GTCTTTACTC TCGGAGGGTC ATGGAGTGGT
GGACGAAGGG GCAACAGGGG AGGCGAGGTA TGGAGTCCAA GCGGTGGGTG GGTTTTGAAG
ACTAACATTC TCATTCCCGG AAGCTCCACC TTGCTAACAA ACGACCGTGG TGGTATCTTT
CGGTCGGACA ACCACATGTG GCTCTTCACT GCTCCCAACG GTAAAGTATT TCATGCCGGA
CCGTCGCAAA GAATGCACTG GATCGATATT GCTGGCGAAG GAGAAATATC CGACTCTCTT
CTCCGTGGCA ACGACAACGA CGCTATGAAC GGCAATGCGG TCATGTTTGA TATTGGCAAA
ATTTTCACCG TCGGAGGCGC TCCCAATTAT GAGTATGGTG ATAACGAAGG AACAAAGCTG
GCCCACGTTA TTGATATCAA CGCTGGAGAA GGGTCTGAGA CTGTTGAGAG GGTCGGTGAC
ATGGCCTTCG CAAGGACACT GGCTAATAGC GTGGGTCTTC CCTCGGGAGA GGTGATTGTT
GTTGGCGGTC AAACGCGAGT ATTTCTCTTC ACAGACAGAG AAGCTGTCTT TGCTGCCGAG
ATTTGGAGTC CTATCACAGG CCAGTTTACG ACTTTGGCGG AAATGAAGAT ACCGCGAACC
TACCACAGTG TAGCAATATT GATGAAAGAT GGTCGCGTAT GGGCAGCAGG TGGCGGCCTT
TGCGGAAATT GTCCTACAAA TCATCAAGAC GCTGAGATTC TTACACCACC CTACTTGCTC
AATGGAGATG GTTCCCTTAA GACCCGGCCT GTCATAGAGT CTTCACCGTC TCGGATAGTC
CCCGGTGAGA CGATTACTGT ATCGGTGGAC AGGAGCGGTA GCCACAACTT TGTGCTTATG
CGGATTTCCG CTGTTACTCA CTCTGTGAAC AACGACCAGC GGCGCATACC ACTCACGATT
GTAGGTGGCG ACAATAATTC CTTTCAATTG ATTGCTCCGG ACAACTACAA TGTGACTGTA
CCTGGAACAT ACTTCTTGTT CGCCATGAAT GCAGATGGTG TTCCAAGTGT TGGAAAGACG
ATTGTAGTTG ACGCACCAGA CGGTCCGGTG CCAGAGCCGT CGCTCATCTT TCCTATCGAG
TCTGCGGACT TTAGTGGTCT GTGCGTAAAT ATTGCCAGCA ACAGCTTTGA GAATGGGGCC
CAAGCTACTC AATGGACGTG CAATGAGAAC GCTAACCAGC AATTTGAGTT CCAATTTGTG
GAAGGAGGGC TCTACCGTAT TGTCGCCTTC CATTCCCAGA AATGCTTGAC TGTTACTCAA
GGATCGATAA GTGAGGGAGA AAATATTGTA CAAGAGCCTT GTGACGACGT TCCTCATCAA
CTATGGACCG TCACGGGATC TGGGAGTGGC CAGGAACTCA AGGCTTCACA TTCCAACAAA
TGCTTGAGCA TTTTTGAATC CTCCATGGCG ACTGGCGCGA GGTTGGTTCA ATTGGAATGC
ACTGAGGGAC CCGCTCAACT CTGGCAAATA GATGACCGAT TGACCTTATC GGAGGTAGAG
GCCCCATCCC CCTTTAGGCC ACCGAGCTTG GCACCAAGTG TGAGCCCCGC GCCAGTTGCA
GCGTTGGCAA GTCTACCACC GACAACAGCC GCAGGGCCGC CAGTCTTCTC CCTTCGAACA
GGATCATCGC TAGACCTCCC TTACATATCA GCTGGGGGGC CGGCAAGCAA GACTTACCAG
GATCCTACTC CGTCAGCAAT CTCCGGAGCC GGAGCGTATG GGGACGCAAC ATTCCAGCGC
CATCGATGGG GGAACACCTT TACTTTTACC ATCCCTGGCT TCGTGGCCGG CAACACATAC
GCTGTCACCC TTGGTTTCGC GGAGGTCTAC TTTTGTGCTG CGAGTAGCTC CCGTACCATG
ACTATAACCG TAAACGGCGA AAGCTTCGCC ACGAATTTGG ACGTCTTTGA AGCTGCCGGC
GGTTGCAATT CGGCTCTTTT ACTGACGCAA GAATTCAGCG CCAGTAGTGC AGGTGATTTT
GTTTTAGCCT TTGCCAGTCC GATTCAGAAT GCCATGATAT CACTGATCGA AGTAAGATCA
GACGCAGGAT CGCCTCTTCC TGATGAGTCT GTGCAGGCAC CGCAGGGTCC GACTGTCTCC
CCAGGGACGA CCCAATCACT GCAACCAAGC TCGGTTCCGA TGCTGAGCGC CGAGCCAACG
GATATATCGG TGCCACCTTC AGTCGTGCCG TCTGTACAGC CAGTCACGAT GCCCAGCATA
ATTCCGTCCT CAATAGTAGG GCAGCCCAGC GGTTCACCGC TTGATAAGCA GAGTCGGACA
CCGTCTGTCA TACCATCCTC GTCTCCGAGT TTCAGTCGCG GGTCAAGCTT GACTCCAAGC
ACAGGTCCTA GCTTGACTCC TAGTTTATTC CCATTTTCCC TGCCATCGAC CACCCCAAGC
CGATCACCTG CTTTCGAGCG GAGTCCTACC CCATCAACAA CACCAAGTAA CTCTCCGTCG
TTGCAGTTGT CAGAAGAGCC GAGCGCCTCT CCCCTTGTCG CGCAAAGTCG TAGTCCGTCT
ACCGTGCCGT CTTTGTCTCC AAGCTCCAGA CCTGAGTCGT CCATAAGGCC AAGCGAAGGA
CCTAGCTCAA CACCTAGTTA TGGGCCTGTC TCCCCGCCAT CAACCACACC AAGCCGATCG
CCTGCTCGAG AGCCGAGTCG CGTTCCGTCG ACCACACCGA GTTCATCTCC AAGCGCTCTG
CCAAGTACGA CCCAAATTAC TACTGGTGTC CCAACTACAG CTACTCCGGG AGAAGCATGG
ACGATACAAT CCAGTGCCGC AAATAATAAC TGGACTGCGG TGATATATGG CAACGGGACA
TTTGTCGCAG TTGCGGCAAC CGGCATCGGC GACCGGGTCA TGACAAGTCC CTATGGTACC
ACGTGGACGA TACGAGCGAG TGCAGCAGAT AACGACTGGA ACGGTCTGAC GTACGGTGAT
GGGATATTCG TCGCTGTTGC CAGCACGGGT CTTGGCAACC GGGTCATGAC CAGTCCAGAC
GGCATCGCGT GGGCTAGTCG ACCGAGTGCT GCGGACAATA ACTGGACTGC AGTGGCGTAC
GGCAATGGAA TATTCGTCGC GGTTGCGGCA TCTGGTATTG GCAACCGTAT CATGACGAGT
CGTGACGGCA CAACTTGGAC ACTCAGAGGG AACGCCGTAG ACAATGAGTG GCGAAGTGTA
ACGTATGCCG AGGGGACGTT CGTCGCTGTA GCGAGTACCG GCATTGGGAA CCGAGTCATG
ACGAGTCCCG ATGGCATCCA GTGGACGATT CAAACCAGCG CTGCAGACAA TTGGTGGTCT
GCCGTCACGT ACGGCGACGG GACGTTTGTT GCTGTTGCGG CAACCGGCAC TGGCGACCGG
GTCATGACAA GTCCCGACGG GATCACATGG ACGACTCAAA CAAGCGCCCC AGACATTGAT
TGGCGCAGCG TGACTTATGG GGATGGGATA TTCGTTGCCG TTGCGAGTAC CAGTATTGGC
AACCGGGTCA TGACAAGTCC TGACGGGATC ACGTGGACGA CTCAAGGCAG TGCCAACGAC
AATGATTGGC ACTCCGTGAC TTATGGCAAT ACAACATTCG TTGCCGTGTC AAAAACGGGA
ATCGGAAACC GGGTCATGTC CAGTGGTTAA
 
Protein sequence
MGMFASTTRR HHASLTSVLC LLVLTVPLFA QTTPQRQIVS ELSLCVEVAG ASQDDGASIF 
QGDCNDGNKH QVFDFIPAPG TDSGFHRIRA SHSNKCLGVA DGALAPGAEV VQLSCVDNNP
STLWKQRDGA LILQHSGYCL SVDVSSRSTS GAFMVQWFCD SPSVKWQVKS VSEQHDGLQQ
LSKRGNSVGK SQSGFYLSTG TPHDNQFLTK GIQARMLADV PTASPKLSTE PRIARAIDVS
TIVSEGLSGL CVDIIDGSEM DGAQAIQASC NGGASQEYQF LIVGEGQFQV VASHSQKCLG
VADFDVTESA NIIQLPCTNN TLWYVVGDSA YLQLRVLHSA KCLSIFGASI ASGAKLVQKA
CNEGLDQRWS VADGLFVVET LKPSTSAAPS PSPSVSFEPT RAGAGKGPPA PTIQPIDVPS
SMPALRGSRS PSRRPSQAVG VSPGPPLFYL NTGTDQDLEY ISGGAVAPGF VPSSSAEPTV
APEPNPWEGE YAMSLVAVAA ANLDDGRILA WSAWSRTDYA RSVGKTFISI FDPSTNESTE
GEITNTNHDM FCPGTATLGD GRIMITGGSS AASVTFFDPS ANNWYRGPPM NIPRGYHSMT
VLGDGSVFTL GGSWSGGRRG NRGGEVWSPS GGWVLKTNIL IPGSSTLLTN DRGGIFRSDN
HMWLFTAPNG KVFHAGPSQR MHWIDIAGEG EISDSLLRGN DNDAMNGNAV MFDIGKIFTV
GGAPNYEYGD NEGTKLAHVI DINAGEGSET VERVGDMAFA RTLANSVGLP SGEVIVVGGQ
TRVFLFTDRE AVFAAEIWSP ITGQFTTLAE MKIPRTYHSV AILMKDGRVW AAGGGLCGNC
PTNHQDAEIL TPPYLLNGDG SLKTRPVIES SPSRIVPGET ITVSVDRSGS HNFVLMRISA
VTHSVNNDQR RIPLTIVGGD NNSFQLIAPD NYNVTVPGTY FLFAMNADGV PSVGKTIVVD
APDGPVPEPS LIFPIESADF SGLCVNIASN SFENGAQATQ WTCNENANQQ FEFQFVEGGL
YRIVAFHSQK CLTVTQGSIS EGENIVQEPC DDVPHQLWTV TGSGSGQELK ASHSNKCLSI
FESSMATGAR LVQLECTEGP AQLWQIDDRL TLSEVEAPSP FRPPSLAPSV SPAPVAALAS
PSLTPSLFPF SLPSTTPSRS PAFERSPTPS TTPSNSPSLQ LSEEPSASPL VAQSRSPSTV
PSLSPSSRPE SSIRPSEGPS STPSYGPVSP PSTTPSRSPA REPSRVPSTT PSSSPSALPS
TTQITTGVPT TATPGEAWTI QSSAANNNWT AVIYGNGTFV AVAATGIGDR VMTSPYGTTW
TIRASAADND WNGLTYGDGI FVAVASTGLG NRVMTSPDGI AWASRPSAAD NNWTAVAYGN
GIFVAVAASG IGNRIMTSRD GTTWTLRGNA VDNEWRSVTY AEGTFVAVAS TGIGNRVMTS
PDGIQWTIQT SAADNWWSAV TYGDGTFVAV AATGTGDRVM TSPDGITWTT QTSAPDIDWR
SVTYGDGIFV AVASTSIGNR VMTSPDGITW TTQGSANDND WHSVTYGNTT FVAVSKTGIG
NRVMSSG