19 homologs were found in PanDaTox collection
for query gene PCC7424_1183 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_1183  photosystem I reaction center protein PsaF subunit III  100 
 
 
162 aa  334  2e-91  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.366807 
 
 
-
 
NC_011726  PCC8801_3402  photosystem I reaction center protein PsaF subunit III  69.09 
 
 
165 aa  238  2e-62  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2714  photosystem I reaction center protein PsaF subunit III  69.09 
 
 
165 aa  238  2e-62  Cyanothece sp. PCC 8802  Bacteria  unclonable  7.62882e-07  normal  0.402807 
 
 
-
 
NC_008312  Tery_1634  photosystem I reaction center protein PsaF, subunit III  64.24 
 
 
163 aa  211  3e-54  Trichodesmium erythraeum IMS101  Bacteria  normal  0.764261  normal 
 
 
-
 
NC_007413  Ava_1478  photosystem I reaction center protein PsaF, subunit III  58.54 
 
 
164 aa  197  5e-50  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  1.94219e-12  normal 
 
 
-
 
NC_014248  Aazo_4978  photosystem I reaction center protein PsaF subunit III  57.93 
 
 
164 aa  196  1e-49  'Nostoc azollae' 0708  Bacteria  unclonable  1.64624e-06  n/a   
 
 
-
 
NC_011884  Cyan7425_4002  photosystem I reaction center protein PsaF subunit III  58.54 
 
 
164 aa  194  4e-49  Cyanothece sp. PCC 7425  Bacteria  normal  0.0318686  hitchhiker  3.20389e-09 
 
 
-
 
NC_007604  Synpcc7942_1250  photosystem I reaction center subunit III precursor  58.54 
 
 
159 aa  186  1e-46  Synechococcus elongatus PCC 7942  Bacteria  hitchhiker  0.0041736  normal 
 
 
-
 
NC_007513  Syncc9902_1728  photosystem I reaction center subunit III  54.88 
 
 
158 aa  171  4e-42  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0634  photosystem I reaction center subunit III (PsaF)  56.71 
 
 
158 aa  162  2e-39  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_06701  photosystem I PsaF protein (subunit III)  40.57 
 
 
170 aa  115  2e-25  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008819  NATL1_05241  photosystem I PsaF protein (subunit III)  38.04 
 
 
185 aa  111  5e-24  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.161495 
 
 
-
 
NC_007335  PMN2A_1801  photosystem I PsaF protein (subunit III)  38.04 
 
 
185 aa  110  8e-24  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_009358  OSTLU_31108  psaF, PSI-F, subunit III, photosystem I polypeptide  40.37 
 
 
232 aa  108  3e-23  Ostreococcus lucimarinus CCE9901  Eukaryota  decreased coverage  0.000169321  n/a   
 
 
-
 
NC_008817  P9515_05331  photosystem I PsaF protein (subunit III)  38.41 
 
 
184 aa  97.1  9e-20  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_04941  photosystem I PsaF protein (subunit III)  40.85 
 
 
184 aa  95.1  4e-19  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_05241  photosystem I PsaF protein (subunit III)  40.85 
 
 
184 aa  95.1  4e-19  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_04691  photosystem I PsaF protein (subunit III)  39.44 
 
 
183 aa  93.6  1e-18  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.23747  normal  0.566924 
 
 
-
 
NC_007577  PMT9312_0469  photosystem I PsaF protein (subunit III)  36.62 
 
 
184 aa  90.5  9e-18  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
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