Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_05241 |
Symbol | psaF |
ID | 4780735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 476154 |
End bp | 476711 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640083799 |
Product | photosystem I PsaF protein (subunit III) |
Protein accession | YP_001014351 |
Protein GI | 124025235 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.161495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCGTC TTTTATCAAT TCTTCTTTCA GCATTTCTTT TCTTAGGAAT AGCTCCAATA GCTAATGCAA GACCAGGCCC CGCACTAAAC GCTGATAGAG CTCCTACAGA TTTTACTGCT TCTGCTTTAG TTTCTTGCGC TGATAATCCC CGTTTCCAAG AGAGAGCAAG TACCGCCTCC ACAGATCAAG CCATAAAAAG ATTTGAAAGA TATAGCAAAG CCCTTTGCGG AGACGACGGG CTGCCTCATC TAATAATTGG TCCACCCATT GAACCTTGGG GTGCATGGAT CAACAGAGGT CATGAAGGAG ATCTACTTAT CCCAGGAGTA ATGTTTATCT ATATTGCGGG GATTATTGGT TGGTCTGGTA GGGAGTATGT AAGAGCTGTT AGAGGCAAAA AGAACGCAGC AGAATACGAA ATCATCATCG ACACTTCACT CGCCTGGCAA TGTTTAAAAA GAGGAGCGGC TTGGCCACTT CAAGCTAATA GAGAAGGTAA AAATGGAGAA CTCAGGGCAA AAGACAATAA CGTTTCTCTT AATGGTCCAA GAGGCTAA
|
Protein sequence | MSRLLSILLS AFLFLGIAPI ANARPGPALN ADRAPTDFTA SALVSCADNP RFQERASTAS TDQAIKRFER YSKALCGDDG LPHLIIGPPI EPWGAWINRG HEGDLLIPGV MFIYIAGIIG WSGREYVRAV RGKKNAAEYE IIIDTSLAWQ CLKRGAAWPL QANREGKNGE LRAKDNNVSL NGPRG
|
| |