7 homologs were found in PanDaTox collection
for query gene Msil_0013 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_0013    100 
 
 
742 bp  1471    Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010511  M446_5749  binding-protein-dependent transport systems inner membrane component  86.84 
 
 
735 bp  71.9  0.0000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.700079  normal  0.0254377 
 
 
-
 
NC_008686  Pden_2356  binding-protein-dependent transport systems inner membrane component  90.57 
 
 
783 bp  65.9  0.00000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2851  binding-protein-dependent transport systems inner membrane component  94.74 
 
 
858 bp  60  0.000001  Thauera sp. MZ1T  Bacteria  normal  0.328809  n/a   
 
 
-
 
NC_009485  BBta_5956  ABC transporter permease  85.29 
 
 
738 bp  56  0.00001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.560438  normal  0.224693 
 
 
-
 
NC_009952  Dshi_0687  two-component system, permease component  96.55 
 
 
777 bp  50.1  0.001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0143417  normal 
 
 
-
 
NC_011894  Mnod_5974  binding-protein-dependent transport systems inner membrane component  81.72 
 
 
735 bp  50.1  0.001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0830301  n/a   
 
 
-
 
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