9 homologs were found in PanDaTox collection
for query gene Gmet_0079 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_0079  hypothetical protein  100 
 
 
296 aa  613  1e-175  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00913842 
 
 
-
 
NC_010085  Nmar_0850  adenylate/guanylate cyclase  23.16 
 
 
278 aa  51.2  0.00002  Nitrosopumilus maritimus SCM1  Archaea  n/a    decreased coverage  0.0000130568 
 
 
-
 
NC_007794  Saro_2386  adenylate/guanylate cyclase  26.22 
 
 
681 aa  48.1  0.0002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5435  hypothetical protein  27.06 
 
 
404 aa  46.2  0.0006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.423535  normal  0.185404 
 
 
-
 
NC_007958  RPD_4017  adenylyl cyclase class-3/4/guanylyl cyclase  27.19 
 
 
701 aa  45.4  0.001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.556421 
 
 
-
 
NC_011004  Rpal_2534  adenylate/guanylate cyclase with Chase sensor  27.66 
 
 
764 aa  45.8  0.001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.263424  n/a   
 
 
-
 
NC_007802  Jann_1674  adenylate/guanylate cyclase  25.32 
 
 
731 aa  44.3  0.003  Jannaschia sp. CCS1  Bacteria  normal  0.285397  normal 
 
 
-
 
NC_007413  Ava_4645  adenylate/guanylate cyclase  25.42 
 
 
546 aa  42.7  0.007  Anabaena variabilis ATCC 29413  Bacteria  normal  0.98897  normal  0.0884819 
 
 
-
 
NC_009485  BBta_6677  ferredoxin  25.87 
 
 
577 aa  42.7  0.007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.869083  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>