8 homologs were found in PanDaTox collection
for query gene Bamb_1887 on replicon NC_008390
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008390  Bamb_1887  hypothetical protein  100 
 
 
163 aa  328  1e-89  Burkholderia ambifaria AMMD  Bacteria  decreased coverage  0.000134466  n/a   
 
 
-
 
NC_010087  Bmul_5785  transposase IS4 family protein  74.29 
 
 
204 aa  56.6  2e-07  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6412  IS4 family transposase  65.71 
 
 
262 aa  49.7  2e-05  Ralstonia eutropha JMP134  Bacteria  normal  0.510008  n/a   
 
 
-
 
NC_007337  Reut_D6468  IS4 family transposase  65.71 
 
 
262 aa  49.7  2e-05  Ralstonia eutropha JMP134  Bacteria  normal  0.572401  n/a   
 
 
-
 
NC_007347  Reut_A1566  IS4 family transposase  65.71 
 
 
262 aa  49.7  2e-05  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7677  transposase IS4 family protein  64.71 
 
 
247 aa  49.7  2e-05  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5739  transposase IS4 family protein  64.71 
 
 
136 aa  47.8  6e-05  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A0555  ISJP4 transposase  55.88 
 
 
212 aa  41.6  0.005  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0733483  n/a   
 
 
-
 
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