6 homologs were found in PanDaTox collection
for query gene Bamb_1885 on replicon NC_008390
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008390  Bamb_1885  hypothetical protein  100 
 
 
532 aa  1078  Burkholderia ambifaria AMMD  Bacteria  decreased coverage  5.51377e-05  n/a   
 
 
-
 
NC_010681  Bphyt_1158  hypothetical protein  42.12 
 
 
456 aa  265  2e-69  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1916  hypothetical protein  37.23 
 
 
237 aa  140  7e-32  Burkholderia thailandensis E264  Bacteria  normal  0.794366  n/a   
 
 
-
 
NC_008786  Veis_3662  hypothetical protein  32.92 
 
 
324 aa  122  2e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.508522  normal 
 
 
-
 
NC_008757  Pnap_4317  hypothetical protein  32.39 
 
 
342 aa  95.1  3e-18  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.450862 
 
 
-
 
NC_010002  Daci_1613  hypothetical protein  27.23 
 
 
339 aa  55.8  2e-06  Delftia acidovorans SPH-1  Bacteria  normal  0.0414314  normal 
 
 
-
 
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