| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_07080 |
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| Symbol | |
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| ID | 9296912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Croceibacter atlanticus HTCC2559 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014230 |
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| Strand | + |
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| Start bp | 1576592 |
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| End bp | 1577491 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | |
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| Product | putative transmembrane rhomboid family protein |
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| Protein accession | YP_003716175 |
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| Protein GI | 298207996 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAA TAACAGATTT AAAATTAAAA TACAGTCGCC TTAATATTGC AGAAAAGCTC
ATAGCTATAA ATATAGTTGT GTTTATTTTT GTGTTTGTAT TACGTACTGT TGGGTTTTTA
TTGCAAGCAC CACAAACGCC TTTATTAGAC TGGTTTGCCT TTCCAAAAGA TGTAGATGAG
TTTATTTTTA AGCCTTGGAC ACTCATTACT TATGCATTTT TTCATTCTGG GTTATGGCAT
ATTTTGGGTA ATATGCTTAT TCTATTTTAC GCAAGTCAGT ACTTCTTAAA CTATTTTTCA
CCTAAACGTT TACTTAACTA TTACTTTCTA GGCGCCATAT GTGGTGCATT GGTATTTATG
TTAAGTTACA ATGTGTTTCC AGCTTTTCAA GGTCAAGGCC GTTCTACATT AATTGGAGCT
AGTGCTGCAG TAATGGCTGT ACTTGTTGGT ATTGCAACAC ATATCCCACA TATGCGTATT
AGACTAATGT TTTTAGGTAG TATTAAATTC TGGTGGATAG CTGCCTTTTT AGTAGTAATT
GATGTGATAC AAATTCCTTT AAATAATCCT GGTGGTCATT TGGCGCATTT AGGAGGTGCA
TTGCTTGGTT ATATTTACAC TAAGCAGTTA GCTAAAGGAC ATGATATTGG CAGCGGATTT
GAAAAACTAG CAGATTGGGT TTCAGGATTA TTTAGCAAAA CATCTAGAGA AAAGAAAAGC
CCTTTAAAAA CGGTTCATAA AACTAAACGC TCTAAAGCGA CTACTGCTAA AAAGCCTAAG
AAAGATGACC AACAAAAGAA AGTAGACGCT ATCTTAGATA AGATTAGCAA AAGCGGTTAT
GACAGTTTAA CAAAAGCAGA AAAGGACTTT CTATTTAACG CAGGAAAAGA CAATATATGA
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| Protein sequence | MSAITDLKLK YSRLNIAEKL IAINIVVFIF VFVLRTVGFL LQAPQTPLLD WFAFPKDVDE
FIFKPWTLIT YAFFHSGLWH ILGNMLILFY ASQYFLNYFS PKRLLNYYFL GAICGALVFM
LSYNVFPAFQ GQGRSTLIGA SAAVMAVLVG IATHIPHMRI RLMFLGSIKF WWIAAFLVVI
DVIQIPLNNP GGHLAHLGGA LLGYIYTKQL AKGHDIGSGF EKLADWVSGL FSKTSREKKS
PLKTVHKTKR SKATTAKKPK KDDQQKKVDA ILDKISKSGY DSLTKAEKDF LFNAGKDNI
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