| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_00555 |
|---|
| Symbol | |
|---|
| ID | 9295591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 135925 |
|---|
| End bp | 137178 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter efflux protein |
|---|
| Protein accession | YP_003714880 |
|---|
| Protein GI | 298206701 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.29728 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATCT ATTTTAGAGT CTTAAAAGAA AGCTTCAACT TTGCTATAAA TGCATTGCGT
AATAATATGT TACGTACATT CTTGTCGTTA CTTGGTGTAA CAATAGGAAT CTTTTCTATC
ATTGGAGTTC TTGCAGCAGT TGATTCTTTA AAACAAGAAA TTACAGGAAG CTTAAGCTCT
TTAGACAATA GCACAATGTA TGTAATGCGT TTTTCTTTTG GTCCTACAGA AATACCACAA
TGGAAACGAG AGCAATTTCC AGATGTTACA TATGAAGAAT ACCAATACCT TAAGAGAAAT
GTATCGGATA TTGAAGCTAT TACCTATACA TTAAACGTTG CCCCAGAAAC TTTAAAATAT
CAAGATAACT CGGTTTCTAG TGTAAATCTA GCACCAGTAA CAGATGAGTA TTATGATATT
GAAGCATTGC AAATTGCAAA AGGGCGCTTT TTTAATGAGC AAGAATCTAA TTCTGGCTCA
CCAGTTATAG TTATTGGAGA TGAGATTGCA AACAACCTCT TTGGTAATTT TGATCCTATA
GGAAAGCAAA TTAGAGTTTA TGGCCAAAAG CTTACCGTAG TTGGTGTTCT TAAAAAAGAA
GGTTCAGGAC TTTTTGGAGA TAGTAAGGAT ACTGCAGCTA TGCTACCTGT TAACTTAGTA
AGGCGTGTTT TTGGAGATAA TAACAAATCT GTTTTTCCTG CAATAATTCT GAAACCTGAA
CCTGGTGTAG ATATTCCAGA ATTTACAGCG CTCTTAGGAC AGCAAATGAG ACGTAAGCGT
GGCTTAAAGC CAGATGAGAT AGATAACTTC TTTGTAAACC AACTTCAGGG TTTTGCAGAT
TTTATAGATA ATATAACTGG ACAGATGAAT ATTATTGGTC TCATTATCTC TGGCTTTTCA
CTTTTAGTAG GAGGTTTCGG GATTGCCAAT ATTATGTTTG TAAGTGTAAA GGAGCGTACC
AACCTTATTG GTATTCAAAA ATCTCTTGGA GCTAAAAACA GATTTATATT GTATCAATTT
TTGTTTGAAG CTGTTATCTT AGCTGTAATA GGAGGCCTAG TAGGACTCTT TTTTGTGTGG
ATAATTTCTT TAATCGCCTC TAGCTTTACA GGAGATTTTG AGTTTGTACT TTCTCCATTT
AACATGTTTA TAGGTACAGC AATATCTGCC GTAATTGGCT TAGTTTCTGG TATTGTGCCA
GCAGTTTCAG CATCTAAGTT AGATCCTGTT GAAGCTATAA GAACTGGAAT GTAA
|
|---|
| Protein sequence | MLIYFRVLKE SFNFAINALR NNMLRTFLSL LGVTIGIFSI IGVLAAVDSL KQEITGSLSS
LDNSTMYVMR FSFGPTEIPQ WKREQFPDVT YEEYQYLKRN VSDIEAITYT LNVAPETLKY
QDNSVSSVNL APVTDEYYDI EALQIAKGRF FNEQESNSGS PVIVIGDEIA NNLFGNFDPI
GKQIRVYGQK LTVVGVLKKE GSGLFGDSKD TAAMLPVNLV RRVFGDNNKS VFPAIILKPE
PGVDIPEFTA LLGQQMRRKR GLKPDEIDNF FVNQLQGFAD FIDNITGQMN IIGLIISGFS
LLVGGFGIAN IMFVSVKERT NLIGIQKSLG AKNRFILYQF LFEAVILAVI GGLVGLFFVW
IISLIASSFT GDFEFVLSPF NMFIGTAISA VIGLVSGIVP AVSASKLDPV EAIRTGM
|
|---|
| |