Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_00445 |
Symbol | |
ID | 9295569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 116466 |
End bp | 117683 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | tyrosine type site-specific recombinase |
Protein accession | YP_003714858 |
Protein GI | 298206679 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.459489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCGG TAAAGATTAT TCTGAGAAAA GACAAGATAG ACAAAACAGG CGATGCACCT CTATATCTAA GAGTAATTAA AGACCGTAGA ACTAAGTTTA TTTCTTTGAG TCTTAAACTT CATCCAAATG AATGGGATGA TGACAAACAA AAGGTAAAGA AGAACCATCA AAACTCTACC AGGTTAAATG CTTATATCTC AAAAAAGGTA GCAGATGCAG AAGGGGAAAT TGCCGACTTA GAAAGACGTA ATCAATCCAC CTCAGCAAGA CGAATTAAAG AAGCTATCAA AGGCAAGCCT TTAATTAACT TCTTTGACTT TGCTTTTGAC AGATGCGAGA AGCTAAAAGA TACAGTAACC CTTTCCACTT ACAGAAGTTA TAAAAACAAC ATAGAGAAAT TTGAAAGGTT TGTTGGCCAT AGAGAATTGA TGTTTGATGA CATCACAGCC ACAACCTTAA AAAACTACGC TTCTTATTGT AGTTCAAAAT TAGGTAATAA CAACACTACA ATTAATTACG CTTTTAGAAT CTTAAACTTA ATGTTTCGTG AAGCTAAGAG AGAAGACCTT ATTTCCAACG AATTAGCACC CTTTACCAAA TTCAAGGTAA AGAAAAATAA AACCACTAAA CGTTACCTAA ATGCAGAACA ATTTGATGCT TTTATGAATT TAGAGGTTCC AGACAAGCAT AAAGCACAGG TCATTAAGGA TATGTTTATT TTTTCGGTAT TCTCTGGTGG TTTAAGGTTC GGAGATGTTA TCGAATTACA ATGGAAAAAC TACGATAAGA AAAATCACCG TATCACTAAA ACGATACGCA AGACCAAAAG GCAACACAGC ATAAGAATAG GTCAAAAAGC TATTGATATT TTGGAGAAAT ACGCATCATA TGATAACAGT CAAAACGATA TTATTTTTCC ATTTGCCAAG ATAGACGAAC AGTATTTTAA GGATAGAGAG CATAGAAGTT TAATTACCAA TAGAGCAATT TCATTAAGTA ATATGTATCT CAGTAGAATG GGTAAACAGT TGGAGCTACC GTTTAATTTA TCCTTTCACA TAAGCCGTCA TACATTCGCT ACAAGAGCCT TAAACAATGG TATGCGTATA GAACACGTCT CAAAATTAAT GGACCATACA GATATAGGTA TAACTCAAGT TTATGCTAAA ATCATAAGTA GCGAATTAGA TAATGCGGTA GATAAATACA TCAATTAA
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Protein sequence | MASVKIILRK DKIDKTGDAP LYLRVIKDRR TKFISLSLKL HPNEWDDDKQ KVKKNHQNST RLNAYISKKV ADAEGEIADL ERRNQSTSAR RIKEAIKGKP LINFFDFAFD RCEKLKDTVT LSTYRSYKNN IEKFERFVGH RELMFDDITA TTLKNYASYC SSKLGNNNTT INYAFRILNL MFREAKREDL ISNELAPFTK FKVKKNKTTK RYLNAEQFDA FMNLEVPDKH KAQVIKDMFI FSVFSGGLRF GDVIELQWKN YDKKNHRITK TIRKTKRQHS IRIGQKAIDI LEKYASYDNS QNDIIFPFAK IDEQYFKDRE HRSLITNRAI SLSNMYLSRM GKQLELPFNL SFHISRHTFA TRALNNGMRI EHVSKLMDHT DIGITQVYAK IISSELDNAV DKYIN
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