Gene Mesil_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_1954 
Symbol 
ID9251466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp1943289 
End bp1944116 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003685337 
Protein GI297566365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00280004 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.727691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC GATACTGGCG GCCCATGTGG GCCTTCGTGT TCCGTGACTG GCACCTAACC 
CGGCGCTACA TGAGCTGGGT GGTGGTGTTT GTCTTTTACG CTATCGTCAA CTCGGCGACC
ATCGCCCTCA TCGGCAAGTC GCAGGACGAC TTTAGGCTAA CCCTCACCCT CTTGCTGGGG
GTGCTGTTGT GGTCGTTCTT GTCAGCCATG TACAACGAGA TCGCCAACTC CATCAGCTAC
GAGCGCTGGG AGGGAACTTT GGAGTACACC TTCATGGCCC CGGTCTCGAG GCTCATTCAC
CTCACCGGGG TCTCGCTCTT CGCGATTATC TACAGCGTCC TCAGGACGGT GGTGATCTTA
GTAGGGCTGG TGCTCTTCAT CCAGGTCTCG GTTTCAGGGG CGAACCTGCT GGGGGTCTTG
GTGGTTTTGC TCGTGGCGAG CCTGGCCTTC ATGGGCTTGG GGCTGATGGC CGCGATCCTT
CCGGTGATGA GCCCGGAGAA CGGGGCGCAG GCCACCAATA TCTTCCAGGG CGTGCTGCTC
TTGGTCTCGG GCATCTACTA CCCGGTGAAC GTGCTGCCCG CCTGGGTGCA GCCCTTGGCC
TACTTGAGCC CGGCCACCTA TGCCCTGGAG GCTTCCCGCA AGCTCATGGG CATCAACAAC
CCCGAATCCA CGCCGACCCA CCTGGTGGGG GCTCCCATCT CCTCGGTGCT ACCCGAGCTG
GGCATCCTGC TCTTGATGGG CGTAATCCTG ATCCCGGCAG GGCTCTTGGT GTTCCACCAG
GCCGAGGTCT GGGCTAAGCG TACCGGGAAG CTGAAGAGAA CCGGCTAG
 
Protein sequence
MLERYWRPMW AFVFRDWHLT RRYMSWVVVF VFYAIVNSAT IALIGKSQDD FRLTLTLLLG 
VLLWSFLSAM YNEIANSISY ERWEGTLEYT FMAPVSRLIH LTGVSLFAII YSVLRTVVIL
VGLVLFIQVS VSGANLLGVL VVLLVASLAF MGLGLMAAIL PVMSPENGAQ ATNIFQGVLL
LVSGIYYPVN VLPAWVQPLA YLSPATYALE ASRKLMGINN PESTPTHLVG APISSVLPEL
GILLLMGVIL IPAGLLVFHQ AEVWAKRTGK LKRTG