Gene Ndas_3821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3821 
Symbol 
ID9247692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4582437 
End bp4585889 
Gene Length3453 bp 
Protein Length1150 aa 
Translation table11 
GC content76% 
IMG OID 
ProductUvrD/REP helicase 
Protein accessionYP_003681724 
Protein GI297562750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0155122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00328324 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTGAAA CCCACCCCCA CCCCCACCCC CGCCGGTCCC CGTCCCGCCC CCACCCCGAA 
CCCGAACCCG CTCCCGCTCC TCCTCCCCGC TTCTCGCCCC CGGAACTCGC CCGCCTCCTC
GGCCAGCCCG AGCCCACCGC CGAGCAGTCC GAGGTCATCT GCGCCCCGCT GGAGCCGGGC
GTGGTCATCG CGGGCGCCGG GTCCGGAAAG AGCGAGACCA TGGCCTCGCG CGTGGTGTGG
CTGGTCGCCA ACGGCCACGT GCGCCCCGAG CAGATCCTCG GCCTGACCTT CACCCGCAAG
GCCACCGCCG AGCTGGCCGA GCGCGTGCGC AAACGCCTGG AGCAGCTGCG CGCCACCGAA
CAGCTGCCCG AGGAGCTGCT CGACGGCGAG CCCACCGTGT CCACCTACAA CGCCTACGCC
GGGCGCATCG TCGCCGACCA CGCCCTGCGC GAGGCCGTCG AGCCCACCTC CCGGCTGCTC
AGCGAGGGGC AGGCCTGGCA GATCGCCGCC CGCGTCGTGG GCGAGTACGA CGGCCCCATG
GACCTGATCA CGGTCGGGGC CGACACCGTC ACCCGCCGGG TCCTGGAGCT GTCCGGGCAG
ATCGCCGACC ACCTCACCAC CACCGAGCAG GTGCGCGGCA TCGGCCGGTG GCTGCGCGCG
GCCGTCGACG CCCTGCCGCG CAAACCCGCG GTGCCCACCC GCAACCTGCT CAACGCCCAG
CTGCGCCGCG AACAGCTCCT GCCGCTCGTG GAGGGCTACG AGCACGCCAA GCACGTGCGC
GAGGCCATGG ACTTCGGCGA CCAGGTGTCC CTGGCCGCGC GCATCGCCCA GAACCACCCG
GAGGTCGGCC TCATCGAACG GGGCCGGTTC CGCGTGGTGC TGCTGGACGA GTACCAGGAC
ACCAGCCACG CCCAGCTCGT GCTGCTGCGC GCGCTGTTCG GCGAGGGCCA CGCCGTGACC
GCCGTCGGGG ACCCCTGCCA GTCCATCTAC GGCTGGCGCG GGGCCATCGC CGCCAACCTC
GCCAACTTCC CCAACGACTT CCCGGCCGCG CCGGGCCGGG CCGCGTCCGT GCGCCGCCTG
GCCACCAGCT TCCGCAACGG CGAGAGGATC CTGGAGGTAG CCAAGCACAT CTCCGAGCCG
CTGCGCGCGG AGAGCGCCGA GGTGCCCGTG CTCTACCCCG GCCCGGCCCG GCGCGGCCGC
GGCGCCGTCC GGACCGGTCT GTTCATCGGG CAGCGGGAGG AGGCGCGGTG GATCGCCGAG
CAGGTCGCCG GCTACCTGCG CGCCGCCCCC GGCCGGGCGG GCAGCGCCAC GACCGCCCCC
GACGGGCTGC CCTGGCCGCC GGGGGAGTCG GGGGGCGCCG CGGACGGCGG CGTCAGCCCC
GGCGACGTCG CCGTGCTGTG CCGCAAGCGC TCGCAGTTCC CGGCGATCCG GGAGGCCCTG
GAGGAGCTGG ACATCCCGGT GGAGGTGGTC GGCCTGGGCG GGCTCATGAT GGTGCCCGAG
GTCCGCGACA TCATCGCCAC CCTGCGCGTG GTCCACGACG CCTCCGCGGG CAACGAGCTC
GCCCGCCTCC TCACCGGGCC GCGCTGGCGG ATCGGCCCGC GCGACCTGGC CGCCCTCGGG
GCCCGCGCCG CCGAGCTGGC CCGCCAGACC CGGCGCGACC TCACCGGGCC CGAGCCCGAC
CAGAGCGCCG AGGACGACAT CCTGCGCCGC ACGGTCCTGG ACCTGACCGC CGAGAGCGGC
AGCCTGGTGG ACGCCGTGGA CGACCCCGGC CCCGCCGAGA GGTACTCCGC GACCGCCTAC
GAGCGCCTGG GCCGCCTCGC CGAGGAGCTG CGCTCCCTGC GCAAGCTCGT GGGCCAGCCG
CTGCCCGACC TGGTCACCGA GACCGAGCGG ATGCTCGGAC TGGACATCGA GGTGGGCGCC
CGCAGCGGCC GCGACCCCCT GTCCGCCCGC GCCGACCTGG ACGCCTTCGT CGACCACGCG
GTCCGTTTCG CCGGGAGCAG CGAGGACCCC ACCCTCGGCA GCTTCCTCAG CTACCTCAGG
GCCGCATCGG AACGGGAGAG CGGCCTGGCC CCCGGCGAGC GCGTCGGCGG AAGCGACACC
GTCAAGCTCA TGACCGTGCA CGCCTCCAAG GGGCTCCAGT GGCCCGTGGT GGTCGTGCCC
GGCGTCAGCG GCGGCAAGTA CGCCCCGCTG TTCCCCACGA GCCTGTCCGA GGGCGACATG
TGGATCAAGG GCGAGCACCT GCTGCCCTAC CGGCTGCGCG GCGACCGCCA GAACCTGCCC
GAACTCCTGG CGGTGGACAA GAAGGGCATC GAGGCGTTCA AGGAGGCCGA ACGCGAGCGC
CACCTGCTGG AGGAGCGGCG GCTGGCCTAC GTCGCCGTCA CCCGCGCCTC CTTCGCCCTG
CTGTGCACCG GCCACTGGTG GGGCACCGAC GCCGCGAGCG AGCGCGGGCC CTCCCCGTTC
CTGGAGGAGA TCCGCCTCGC CTGCGAGGGC GGCGCCGGGG AGGTCGCGCA CTGGGAGCCC
AGGCCCGATC CCGACGACAA CCCCTACGAG GAGGAGGACG ACGGCACGGC CGTGTGGCCG
CCGCAGGAGG ACGACGGCTC CGGCCCCCCG GAGGAGGGCG CCGAACCGGA CCGGCCGCGC
GACCGCCGCG CCCAGATCGC CGAGGGCGCG GCCATGGTCG AGCGCGCCCG CGCCCGCCTG
CTCGCGGGGG AGGCCGACCC CGCGGAGGAG GCCGCGCCGC CGCCCGGGCT GCGCCGCCGC
ATCGGGGGCT GGGAGCGCGA CACCGAGCTG CTGCTCGCCC ACCGCCGCGC CGAGGGGCCG
GGATCCGGGG ACGGCACGGT CCAGGTCGAG CTGCCCGCGC ACCTGTCGGT GTCGTCCATG
GTGTGGCTGG CCCGCGACCC CTCCGCCCTG GCCCGGCAGA TCCGCAGGCC GCTGCCGCGC
CCGCCCGCGC CGCACACGCG CCGGGGCACC GCGTTCCACG CCTGGCTGGA GCAGCGGTTC
GGCCAGCGCG CCGCCCTGCT GGACGAGCTG CCCGGCGCCG CCGACGAGAC GGCTGGTCAG
GACGAGGACC TCGCCGACCT CCAGAGCCGC TTCGAGGAGA GCGAGTGGGG CTCGCGCGTG
CCCGTCGAGG TGGAGGTGCC CTTCGAGACG GTCATCGGCG ACCGGCTCGT GCGGGGGCGC
ATGGACGCGG TCTTCCACGA CCCCGCCTCC GGCCGCTACG ACGTGGTGGA CTGGAAGACC
GGGAGCCCGC CCGGCAACGG CCCCGAGCGC CGCGCCGTGG GCGTGCAGCT GGCCGCCTAC
CGGCTGGCCT GGGCCGACCT GGCCGGGGTC TCCCTGGAGG AGGTGAGCGC CGCCTTCCAC
TACGTGCGGG CCGGGCTGAC CGTGCGCCCC GCGGACCTGC TCGACGCCGA GGGACTGGCC
GCGCTCATCG ACGCCGTACC CGAACCCGGG TGA
 
Protein sequence
MSETHPHPHP RRSPSRPHPE PEPAPAPPPR FSPPELARLL GQPEPTAEQS EVICAPLEPG 
VVIAGAGSGK SETMASRVVW LVANGHVRPE QILGLTFTRK ATAELAERVR KRLEQLRATE
QLPEELLDGE PTVSTYNAYA GRIVADHALR EAVEPTSRLL SEGQAWQIAA RVVGEYDGPM
DLITVGADTV TRRVLELSGQ IADHLTTTEQ VRGIGRWLRA AVDALPRKPA VPTRNLLNAQ
LRREQLLPLV EGYEHAKHVR EAMDFGDQVS LAARIAQNHP EVGLIERGRF RVVLLDEYQD
TSHAQLVLLR ALFGEGHAVT AVGDPCQSIY GWRGAIAANL ANFPNDFPAA PGRAASVRRL
ATSFRNGERI LEVAKHISEP LRAESAEVPV LYPGPARRGR GAVRTGLFIG QREEARWIAE
QVAGYLRAAP GRAGSATTAP DGLPWPPGES GGAADGGVSP GDVAVLCRKR SQFPAIREAL
EELDIPVEVV GLGGLMMVPE VRDIIATLRV VHDASAGNEL ARLLTGPRWR IGPRDLAALG
ARAAELARQT RRDLTGPEPD QSAEDDILRR TVLDLTAESG SLVDAVDDPG PAERYSATAY
ERLGRLAEEL RSLRKLVGQP LPDLVTETER MLGLDIEVGA RSGRDPLSAR ADLDAFVDHA
VRFAGSSEDP TLGSFLSYLR AASERESGLA PGERVGGSDT VKLMTVHASK GLQWPVVVVP
GVSGGKYAPL FPTSLSEGDM WIKGEHLLPY RLRGDRQNLP ELLAVDKKGI EAFKEAERER
HLLEERRLAY VAVTRASFAL LCTGHWWGTD AASERGPSPF LEEIRLACEG GAGEVAHWEP
RPDPDDNPYE EEDDGTAVWP PQEDDGSGPP EEGAEPDRPR DRRAQIAEGA AMVERARARL
LAGEADPAEE AAPPPGLRRR IGGWERDTEL LLAHRRAEGP GSGDGTVQVE LPAHLSVSSM
VWLARDPSAL ARQIRRPLPR PPAPHTRRGT AFHAWLEQRF GQRAALLDEL PGAADETAGQ
DEDLADLQSR FEESEWGSRV PVEVEVPFET VIGDRLVRGR MDAVFHDPAS GRYDVVDWKT
GSPPGNGPER RAVGVQLAAY RLAWADLAGV SLEEVSAAFH YVRAGLTVRP ADLLDAEGLA
ALIDAVPEPG