Gene Ndas_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1960 
Symbol 
ID9245810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2385427 
End bp2386074 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content67% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003679893 
Protein GI297560919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.29107e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.96613e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGTGTTG TCATCGCCGA AGACCTTGCC CTCCTCAGAG ACGGCCTGAT CCGACTCCTC 
CAGGCACACG ACTTCACCGT CGTCGCCGCC GTCGACAACG GCCCCGACCT GCACACCGCC
CTCACCGAAC ACAAACCCGA CGTCGCCGTC GTCGACGTCC GCCTACCCCC CACCTTCACC
GACGAAGGCC TCCAAGCCGC CATCGCCGCC CGCACCCAGA TCCCCGGCCT GCCCATCCTC
GTGCTCTCCC AGCACGTCGA ACAGCTCTAC GCCCGCGAAC TGCTCTCCGA CGACACCGGC
GGCGTCGGCT ACCTCCTCAA GGACCGCGTC TTCGACATCG GCCAGTTCAT CGAAGCCGTC
CGCCGCGTCG CCGACGGCGG CACCGCCATG GACCCCGCCG TCATCTCCCA ACTCCTCGCC
CGCCAGGACC AGAGCGGCCC CCTCGCCCAA CTCACCCCCC GCGAACGCGA GGTCCTGTCC
GAAATGGCCG AAGGACGCTC CAACTCCGCC ATCGCCGCAC GCCTCTACAT CACCGAAAAA
GCCGTCAGCA AGCACATCAA CAACATCTTC ACCAAACTCG ACCTGCCGCC CTCCTCCGAC
GACAGCCGCC GCGTCCTGGC CGTCCTGGCC TTCCTCAACG GCCAGTAA
 
Protein sequence
MRVVIAEDLA LLRDGLIRLL QAHDFTVVAA VDNGPDLHTA LTEHKPDVAV VDVRLPPTFT 
DEGLQAAIAA RTQIPGLPIL VLSQHVEQLY ARELLSDDTG GVGYLLKDRV FDIGQFIEAV
RRVADGGTAM DPAVISQLLA RQDQSGPLAQ LTPREREVLS EMAEGRSNSA IAARLYITEK
AVSKHINNIF TKLDLPPSSD DSRRVLAVLA FLNGQ