Gene Ndas_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1108 
Symbol 
ID9244955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1358310 
End bp1358975 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID 
ProductCBS domain containing membrane protein 
Protein accessionYP_003679055 
Protein GI297560081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.512511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA CCGTCGGCGA CCTGATGACC ACGAGTGTCC TGGCCGCCCG GGACGACGCC 
GGGTACAAGG AACTGGCCGC CTTCATGCGG GACCACCATG TCAGCGCGGT GCCCGTGGTG
GACGGCGGGC ACCGCGTCCT GGGCGTCGTG TCGACCGCCG ATCTGCTGCT CAAGCTCGCC
GACCCCGATC CGGAGGAGGG GTACACCGGC GAGCCCTTCC GTGAGCGGCT CGCCCGGATC
AAGAGCACGG GCACGACGGC TCGCGAGCTG ATGACCTCTC CGGCGGTCAC CGTCACCGCC
GCCACCGCGC CCCGTGAGGC GGCGGGGCTG ATGAGACGGC ACGGGTTCAG GCGGCTGCCC
GTGGTGGACG GGGACGGGCG CCTCGTGGGC CTGGTCGGCC GGTCGGACCT GCTGCACGTG
TACGCGGTGG ACGACGCGGA CCTCGAACGG CGGGTGCGGG AGGACGTCGT CCGCGGCCGG
TTCGGGCTGA CCGACGTGGA GACCGGCGTC AGCCACGGCG TGGTCACCCT GAGCGGCGAG
GTCGCGCGCC GGTCCGACAT CCCCCGTCTG GCGCACGCGG TGCGCGACGC CGAGGGCGTG
GTCCACGTCC GCTGCCACCT GACCCACCGC CTCGACGACC TCACCCTCGG AGGAACGTCC
CGATGA
 
Protein sequence
MTKTVGDLMT TSVLAARDDA GYKELAAFMR DHHVSAVPVV DGGHRVLGVV STADLLLKLA 
DPDPEEGYTG EPFRERLARI KSTGTTAREL MTSPAVTVTA ATAPREAAGL MRRHGFRRLP
VVDGDGRLVG LVGRSDLLHV YAVDDADLER RVREDVVRGR FGLTDVETGV SHGVVTLSGE
VARRSDIPRL AHAVRDAEGV VHVRCHLTHR LDDLTLGGTS R