Gene Ndas_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0701 
Symbol 
ID9244543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp863819 
End bp864832 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID 
Productheat-inducible transcription repressor HrcA 
Protein accessionYP_003678652 
Protein GI297559678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGATG AGCGCAAGCT CGCGGTCCTG CGTGCCGTCG TCGAGGACTT CGTCAACACC 
AACGAGCCCG TGGGTTCCAA GGCCCTGGCC GACCGGCACC GGCTCGGAGT CTCCCCGGCG
ACCATCCGCA ACGACATGGT CGCCCTCGAG GAGGACGGCT ACATCGCGCA GCCGCACACC
AGTGCCGGAC GCGTTCCCAC GGACAAGGGG TACCGGCTCT TCGTCGACCG GCTCTCCTCG
GTCAAACCGC TCTCCAGCGC GGAGCGGCGC GCCATCGAGT CCTTCCTCAC CGGCGCCGTG
GACCTCGACG AGATCGTCGC CCGGACCGTG CGGCTCCTCG CGCAGCTCAC CCGCCAGGTC
GCGATCGTCC AGTACCCGTC GCTGACCCGC TCGTCGGTGC AGCACGTGGA ACTGGTCCCC
CTCGGGGGTC AGCGGATCAT GATGGTCGTG ATCACCAACA CGGGCCGGGT CGAGCAGCGC
GTCATCGACG GCCTGGGAGA GGTCCACGAG GCCGCCGTCA ACGACCTGCG CGCGATGTTG
AACCGGGCCA TCGCCGGACG CCACCTCGGC GACGTGCCCG ACGCGGTGGA GGACCTGCCT
CCGCAGGTGG CGCCCGAACA CCGCCAGATG GCGGTGTCGG TCCTCTCCGT CCTGCTGGAG
AGCCTCGTCG AGCGGCACGA GGAGAAGATC GTCCTCGCGG GGACGGCCAA CCTCGCCGCC
GTCGACTTCG CCGCCAGCCT CAGGGACGTC CTGGAGGCAC TGGAAGAGAA CATGGTCCTC
ATCCGTTTGC TGGGAGAGGC CAAGGACCCG TCGATGCTCA CGGTGCGCAT CGGCGCGGAG
AACTTCCACG AGGGCCTGAG GTCCACCTCC ATCGTGTCGG CGGACTACGG TGTGGGAAAC
CAGTCGCTCG CCAAGATCGG TGTGGTGGGA CCCACCCGGA TGGACTATCC GGGGACGATG
GGAGCAGTAC GCGCCGTGGC TCGCTATGTC GGACAGATTT TGGCAGGACA GTAA
 
Protein sequence
MLDERKLAVL RAVVEDFVNT NEPVGSKALA DRHRLGVSPA TIRNDMVALE EDGYIAQPHT 
SAGRVPTDKG YRLFVDRLSS VKPLSSAERR AIESFLTGAV DLDEIVARTV RLLAQLTRQV
AIVQYPSLTR SSVQHVELVP LGGQRIMMVV ITNTGRVEQR VIDGLGEVHE AAVNDLRAML
NRAIAGRHLG DVPDAVEDLP PQVAPEHRQM AVSVLSVLLE SLVERHEEKI VLAGTANLAA
VDFAASLRDV LEALEENMVL IRLLGEAKDP SMLTVRIGAE NFHEGLRSTS IVSADYGVGN
QSLAKIGVVG PTRMDYPGTM GAVRAVARYV GQILAGQ