Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0464 |
Symbol | |
ID | 9244303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 557848 |
End bp | 559821 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003678417 |
Protein GI | 297559443 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.558205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.214983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCCCAG AGCGCAGCAC AGATCCCACC GCCACCCCCA GCTCCTCCGC TCCCACCTCA CGGACCGCGG CCGAAACCCC AACCGAAACC CCGACCGGAA CCAGGGCCGA GACCGGATCC GCGACCGGTG ACCGCGCCGA CCGCTTCGAC TACGACGTCC TGGTCGTGGG CTCGGGCTTC GGCGGTTCGG TGAGCGCCCT GCGCCTCACC GAGAAGGGCT ACCGCGTCGG CGTCCTGGAG GCGGGGCGCC GCTTCACGCC CCAGACGCTG CCCTCCTCGT CCTGGGACGT CCGCAACTTC CTGTGGGCGC CCCGGCTCGG TATGTACGGC ATCCAGCGCA TCCACCTGCT GCGCGACGTG GTGATCCTGG CGGGGGCCGG CGTCGGCGGC GGTTCCCTCA ACTACGCCAA CACGCTGTAC CACCCGCTGG ACCCGTTCTT CGAGGACCCG CAGTGGCGGC ACATCACCGA CTGGAAGTCG GAGCTGGCGC CGTTCTACGA CCAGGCCCGC CGCATGCTCG GCGTGCGCAC CAACCCCACC GTCACCCCCT CCGACGTGCA CATGAAGGCG ATCGCCGAGG ACATGGGCGT GGGGCACACC TTCCGTCTCA CCCCGGTGGG CGTGTGCTTC GGCGACGGAC GGGACGGCGA CGGCCGCCGG GCCGAGCCCG GCGCGTCCGT GGGGGACCCC TACTTCGGCG GCGCGGGCCC CGACCGGCGT GCCTGCACGG AGTGCGGGGA GTGCATGACC GGATGCCGCC ACGGCGCCAA GAACGCCCTG ACCGAGAACT ACCTGTACTT CGCCGAGCGC GACGGCGCCG AGGTGCACCC GCTGACCACC GTCGAGCGGC TGCGCGAACT GCCGGGCGGC GGCTTCGCCG CCGACACCGT CAGGACCGAC GCGCCCCGGC GGCGGTCGAG CGCCCGCACG TTCACCGCCC GCCAGGTGGT CGTGGCCGCC GGGACCTACA ACACCCAGAC GCTGCTGCAC CGCATGCGCG ACTCGGGCGC GCTGCCCCGC CTGTCGGCGA GGCTGGGCAC GCTCACCCGC ACCAACTCCG AGGCTCTCGT CGGCGCGATG ACCCGCCGGG TGAGACCGCA GGAGGACCTG ACCCGGGGCG TGGCCATCAC GTCCTCGATC CACCCGGACG AGAACACCCA CATCGAACCG GTCCGCTACG GCAAGGGCTC CAACGCGATG GCGCTGCTCA CCGCGATGCA GGTGCCCGGC GGCGGGCGGA TCCCGCGCTG GCTGCGGTTC CTGGGGCTGG CCGCGCGCCA CCCGGTGGTG TTCGCCCGCA GCCTCTCCGC CCGCCGCTGG TCGGAGCGGA CCATCATCGG CCTGGTGATG CAGTCGCTGG ACAACTCGCT GACGACGTCG GTGCGGCGGG GGCCGCTGGG CGGGAGGAAG AGGCTGACCT CCCGGCAGGG CCACGGTGAG CCGAACCCGA CGTGGATCCC CGCGGGGCAG GACGCGGCCA CCCGGCTGGC CGAGCGCATC GACGGCTTTC CCGGGGGCAC GGTGGGCGAC GTGTTCAACG TCCCGATGAC CGCGCACTTC CTGGGCGGCT GCCCGATCGG CGACAGCCCG GAGACCGGGG TCATCGACCC CTACCACCGG CTGTACGGCC ACCCGGGCGT CCACGTGGTG GACGGCTCGG CGGTCACCGC GAACCTGGGG GTGAACCCGT CGCTGACCAT CACCGCGCAG GCCGAGCGCG CGATGTCGAT GTGGCCCAAC AAGGGCGAGG AGGACACCCG TCCGGAGCAG GGCGAGCGGT ACCGGCGGGT CGGGCCGGTG TTCCCGGCCT CCCCGGCGGT TCCGGCCGGC GCCTTCGCCG AGCTGCGGTT CACCGCCCCG CTCCCGCTCT CGGTGGTGGA CTCGGAGGCG CCGTCAGCGG ACGCGGCGGC CGTCGGCGGG ACGACCGGGG CCGCTGGGGA GACCGGGGCC GATGGGGAGG ACGCACGAAC GTGA
|
Protein sequence | MPPERSTDPT ATPSSSAPTS RTAAETPTET PTGTRAETGS ATGDRADRFD YDVLVVGSGF GGSVSALRLT EKGYRVGVLE AGRRFTPQTL PSSSWDVRNF LWAPRLGMYG IQRIHLLRDV VILAGAGVGG GSLNYANTLY HPLDPFFEDP QWRHITDWKS ELAPFYDQAR RMLGVRTNPT VTPSDVHMKA IAEDMGVGHT FRLTPVGVCF GDGRDGDGRR AEPGASVGDP YFGGAGPDRR ACTECGECMT GCRHGAKNAL TENYLYFAER DGAEVHPLTT VERLRELPGG GFAADTVRTD APRRRSSART FTARQVVVAA GTYNTQTLLH RMRDSGALPR LSARLGTLTR TNSEALVGAM TRRVRPQEDL TRGVAITSSI HPDENTHIEP VRYGKGSNAM ALLTAMQVPG GGRIPRWLRF LGLAARHPVV FARSLSARRW SERTIIGLVM QSLDNSLTTS VRRGPLGGRK RLTSRQGHGE PNPTWIPAGQ DAATRLAERI DGFPGGTVGD VFNVPMTAHF LGGCPIGDSP ETGVIDPYHR LYGHPGVHVV DGSAVTANLG VNPSLTITAQ AERAMSMWPN KGEEDTRPEQ GERYRRVGPV FPASPAVPAG AFAELRFTAP LPLSVVDSEA PSADAAAVGG TTGAAGETGA DGEDART
|
| |