Gene Tbis_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3290 
Symbol 
ID9169813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3842397 
End bp3843917 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content68% 
IMG OID 
Productxanthine/uracil/vitamin C permease 
Protein accessionYP_003653873 
Protein GI296271241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.179403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGTC ACAGTTCGCG CGTGACTAGC ACGGACTCCG CCAACACCGC CAAGAGCGCC 
CCGACGGGCT TCCTTGATCG CTACTTCTCC ATCACCGCCC GTGGCTCGAC CATAGGCCAG
GAGATCCGTG GCGGGCTCGC CACGTTCTTC ACCATGGCCT ACATCGTGGT GCTGAACCCG
CTCATCATCG GCACCGTCGC GGACGCCACC GGGGAGTACC TCGGTGACGG CTCCTCGCCC
AACCTCCCGC TCATCGCCGC GGCCACGTCC TTCGTGGCCG GCATCTTCAC GATCGCGATG
GGCGTGTTCG GCCGCGTGCC CTTCGCGATC GCGACCGGCC TCGGCCTGAA CGCGTTCCTG
GCGTTCGGGG TGGCGAGCCA GATGTCCTGG GAGGACGCGA TGGGCCTGGT GGTGCTCGAG
GGCATCATCA TCACCATCCT CGTCCTCACC GGCTTCCGGG CCGCCGTGTT CCGCGCGATC
CCGCCCGAGC TCAAGACCGC GATCAGCGTC GGCATCGGGC TCTTCATCGC GCTCATCGGC
TTCGTCGACG CGGGCTTCGT CCGGCGCGTC CCCGACGCGG CCGGCACCAC GGTCCCGGTG
CAGCTCGGCT CGCTCGGCAC CGGCTCGCTC ACCGGCTGGC CGACCCTGGT CTTCGTCATC
GGCCTGCTCG GCACCGCGTT CCTGGTCGCG CGCAAGGTCA AGGGCGCGAT CCTCATCGGC
ATCCTCGGCT CGACCGTGCT GGCGATCATC GTGGAGGCGA TCGCCAAGCT CGGCCCGCAG
GTGGTCGACG GCAAGACCGT CAACCCCGAC GCGTGGTCGC TGAACGTGCC GACGCTGCCC
TCCTCGCTGA TCGAGCTCCC CGACCTGTCG CTGCTCGGCC AGTTCAGCCT CTTCGGCGGC
TTCGCCAAGG TCGGCGGGCT CGCCGCCGTG ATGCTCGTGT TCACGCTCAT GCTCGCCGAC
TTCTTCGACA CTATGGGCAC GATCGTCGGC GTCGGCCGGC AGGCCGGCCT GGTCAAGCCG
GACGGCAGCC TGGAGCGGAC CCGGGAGATC CTGCTGGTCG ACTCGCTCGC CGCCGCGGCC
GGCGGTGCGG CCAGCGTCTC TTCGAACACC ACCTACGTCG AGTCCGCGGC CGGCGTGGGT
GAGGGCGCGC GGACCGGGCT GGCGAGCGTG GTCACCGGCG TGCTGTTCCT GCTGTCGATG
TTCCTCGCGC CGCTCACCGA GGTGGTGCCG TTCGAGGCGG CGACGCCCGC GCTCGTCATC
GTCGGGTTCC TCATGATGAC CCAGGTCAAG GAGATCGATT TCTCCAACTT CGAGGTCGCG
ATCCCGGCGT TCCTGACGAT CGTGCTGATG CCGTTCACCT ACTCCATCAC GGTCGGCATC
GGCGCGGGCT TCATCAGCTA CGTGTTCATC AAGGCGGTCC GGGGTAAGGC ACGGGAGATC
AGCTTCCTGC TCTGGCTCGT GGCGGGCCTC TTCGTCATCT ACTTCGCCAT GGAGCCGATC
AGGAGCCTGT TGGGCGTGTG A
 
Protein sequence
MGCHSSRVTS TDSANTAKSA PTGFLDRYFS ITARGSTIGQ EIRGGLATFF TMAYIVVLNP 
LIIGTVADAT GEYLGDGSSP NLPLIAAATS FVAGIFTIAM GVFGRVPFAI ATGLGLNAFL
AFGVASQMSW EDAMGLVVLE GIIITILVLT GFRAAVFRAI PPELKTAISV GIGLFIALIG
FVDAGFVRRV PDAAGTTVPV QLGSLGTGSL TGWPTLVFVI GLLGTAFLVA RKVKGAILIG
ILGSTVLAII VEAIAKLGPQ VVDGKTVNPD AWSLNVPTLP SSLIELPDLS LLGQFSLFGG
FAKVGGLAAV MLVFTLMLAD FFDTMGTIVG VGRQAGLVKP DGSLERTREI LLVDSLAAAA
GGAASVSSNT TYVESAAGVG EGARTGLASV VTGVLFLLSM FLAPLTEVVP FEAATPALVI
VGFLMMTQVK EIDFSNFEVA IPAFLTIVLM PFTYSITVGI GAGFISYVFI KAVRGKAREI
SFLLWLVAGL FVIYFAMEPI RSLLGV