Gene Tbis_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0539 
Symbol 
ID9167023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp592884 
End bp593597 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID 
Product50S ribosomal protein L1 
Protein accessionYP_003651159 
Protein GI296268527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.653827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0435444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCA GCAAGAACTG GAGGAACGCG GCGGCGCTGG TCGACCGCGA GCGCCTGTAC 
AGCCCGCTGG AGGGCATCCG GCTGGCGAAG AAGACCGTGA CCACGAAGTT CGACCCCACG
GTGGAGGTCG CCATCCGGCT GGGGGTCGAC CCGCGCAAGG CCGACCAGAT GGTCCGCGGC
ACCGTGAACC TCCCTCACGG CACCGGTAAG ACCGCCCGGG TCCTGGTCTT TGCGACCGGT
GAGCGTGCCG AGGAGGCGCG CGCGGCGGGC GCCGACATCG TGGGCGGCGA CGAGCTCATC
CAGGAGGTGG CCAACGGCCG CCTCGACTTC GACGCGGTCG TCGCCACCCC TGAGCTGATG
GGCAAGGTCG GCCGCCTCGG CCGCGTGCTC GGCCCGCGTG GGCTCATGCC GAACCCCAAG
TCCGGTACGG TCACCACGGA CGTGGCCAAG GCCGTGCGGG ACATCAAGGG CGGCAAGATC
GAGTTCCGCG TCGACCGCCA CGCGAACCTG CACCTCATCA TCGGCAAGGC GTCCTTCGAC
GAGCGCCAGC TCCTGGAGAA CTACGCCGCC GCCATCGACG AGGTGCTGCG TCTCAAGCCG
TCCGCGGCGA AGGGCCGCTA CATCAAGAAG GTCACCGTGG CGACCACCAT GGGCCCCGGC
ATCCCGATCG ACCCCAACGT GACGCGCAAC ATCACCGCGG AGCTGGGGTC CTGA
 
Protein sequence
MKRSKNWRNA AALVDRERLY SPLEGIRLAK KTVTTKFDPT VEVAIRLGVD PRKADQMVRG 
TVNLPHGTGK TARVLVFATG ERAEEARAAG ADIVGGDELI QEVANGRLDF DAVVATPELM
GKVGRLGRVL GPRGLMPNPK SGTVTTDVAK AVRDIKGGKI EFRVDRHANL HLIIGKASFD
ERQLLENYAA AIDEVLRLKP SAAKGRYIKK VTVATTMGPG IPIDPNVTRN ITAELGS