| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3810 |
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| Symbol | |
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| ID | 9157990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3932306 |
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| End bp | 3933925 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_003648726 |
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| Protein GI | 296141483 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.749991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCCG GCTCGCTGCG CCGGCAACGG TGCCCGAGTG CGCTGTCGTC GGCTTACGCC
GCGGTTGTCG GACCCCTACG CCACAATCAG GAGGTGCTCT TCGCCGACGT CGTCGCCGCA
TCCACCGAGG TCGGGGCGAC CCGTGCCCGC ACCGCCAAGA TCGCGGCGCT CACCCGATTG
CTGCGCGATG CCGATGCCGC GGATGTCCGG CCGGTGGTGG CGTGGCTCTC GGGCTCGCTG
CTGCAGGAGC GCCTGGGCAC CGGGTGGCGT GGGGTGGCGA AGATACTGGA CGAGCAGGTG
GCCGCGGCGA CCCCGTCTCT CACGGTCGCG GACGTCTCCT CGGCCTTCGA CGAGTTGGCG
GGCACAGCGG GCGCGGGATC GGTGGCACGG CGGGGAGAGC TGCTCGGTGC ACTGTTCGGG
CGCGCCACGG CCGACGAACA GCGGCTGCTC GTCGGATTGA TCACGGGCGA GGTGCGCCAC
GGGGCGCTCG CCGGGGTGAT GACCGACGCG GTGGCCCATG CAGCCGGTGT ACCGCTGGCA
ACGGTCCGCC GCGCCGCCAT GCTCTCGGGC TCGCTGCCCC AGACCGCGTC CGCCGCACTG
GCGGGTGGGG CAGACGCACT AGCCGGATTC GGGCTGGAGG TGCTGCGCGG GGTATCACCG
ATGCTGGCCT CTCCCGCGGA CGATCTGCCC GCCGCACTGG CCGATCTGGG ACCCGAGGTC
AGCGTGGAGT TCAAGCTCGA CGGTGCGCGG ATCCAGGTGC ACCGCAACGG CGATGCGGTG
CGGGTGTACA CCCGCACGTT GCGCGATATC ACCGACGCGG TCCCCGAAAT CGTTGAGACT
GCGATGGCGC TGCCGTGTAC CTCCGTCGTG CTCGACGGCG AATCCCTCGC GCTCACCGAC
GCGGGGCGGC CCCGGCCCTT CCAAGAGACC ATGAGTCGGT TCGGCTCCGC GGGATCGATG
GAGGACGAGC GCTCTGTATT GCGGCCGTTC TTCTTCGACT GCCTGCACCT CGACGGTCGC
GACCTGCTCG ATGAGCCGCT CTCGGCGCGC CTCGCGGCGC TCGAACAGGT GGCGGGCGAT
CTGCGCATCC CCGCGTTGAC ACGGCCATCG GTGGAGCAGG CCTCCGCGCA CCTGGAGGCG
GCGCTCGCGG CGGGACACGA GGGCGTGATG GTCAAGGGGC TGGACTCGCC CTACGCTGCG
GGCCGGCGGG GTCGTGCGTG GCAGAAGGTG AAGCAGTCGT ACACGCTCGA TCTCGTGGTG
CTGGGCGCCG AATGGGGATA CGGCCGGCGA ACCGGGCTGC TCTCGAACCT GCACCTGGGC
GCCCGCGATC CGGATGGCGG CGAGCCGATC ATGGTGGGTA AGACCTTCAA AGGATTGACG
GATGCGCTTC TGCGCTGGCA GACGGAGGAG TTTCCGCGCC ACGAGAGACA GCGGAGCGAG
CACACCGTGT ACCTGCGGCC GGAGATCGTG GTCGAGATCG AGCTCGACGG GGTGCAACGC
TCCCGCCGCT ATCCGGGAGG CGTCGCCCTG CGCTTCGCAC GGGTGCTGCG ATACCGGCCC
GACAAGACGG CGGCCGAGGC CGACACCATC GACGCCGTGC GCGCACTCCT ACCCGGGTAA
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| Protein sequence | MMAGSLRRQR CPSALSSAYA AVVGPLRHNQ EVLFADVVAA STEVGATRAR TAKIAALTRL
LRDADAADVR PVVAWLSGSL LQERLGTGWR GVAKILDEQV AAATPSLTVA DVSSAFDELA
GTAGAGSVAR RGELLGALFG RATADEQRLL VGLITGEVRH GALAGVMTDA VAHAAGVPLA
TVRRAAMLSG SLPQTASAAL AGGADALAGF GLEVLRGVSP MLASPADDLP AALADLGPEV
SVEFKLDGAR IQVHRNGDAV RVYTRTLRDI TDAVPEIVET AMALPCTSVV LDGESLALTD
AGRPRPFQET MSRFGSAGSM EDERSVLRPF FFDCLHLDGR DLLDEPLSAR LAALEQVAGD
LRIPALTRPS VEQASAHLEA ALAAGHEGVM VKGLDSPYAA GRRGRAWQKV KQSYTLDLVV
LGAEWGYGRR TGLLSNLHLG ARDPDGGEPI MVGKTFKGLT DALLRWQTEE FPRHERQRSE
HTVYLRPEIV VEIELDGVQR SRRYPGGVAL RFARVLRYRP DKTAAEADTI DAVRALLPG
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