Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3637 |
Symbol | |
ID | 9157816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3750365 |
End bp | 3752077 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | aminotransferase class V |
Protein accession | YP_003648554 |
Protein GI | 296141311 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCACG CTGGAGACCT GCCCGAACCG CCGATCCTGG GCCGCATCCG CGACAGCCTC ATCGGTGACG ATCAGGTCTT TCCGGGGCCG TTCGGTCCGC GGCGTGTGAC CTACGCCGAT TACACGGCAT CGGGCCGGTC GCTCACCTTC ATTGAGGACT TCATCCGCAA CGAGGTGCTT CCCCGGTACG CGAACACGCA CACGGAATCG AGCGGAACCG GTTTGCAGAC GACACGTTTG CGTGAGGACG CACGCCGTAT CATCCGGGAT GCGGTCGGCG GTGACGACGA GACGGTCGTC ATCTTCACCG GCTCGGGCTG CACCGGGGCG ATCGACAAGA TGGTCGGCGT TCTCGGGCTG CGGATCCCCG ACGGACTCGA TCGCCAGTAC GGGCTTACCG ATCGGATCCC CGCCGCGGAG CGCCCCGTCG TCTTCATCGG ACCGTACGAA CACCACTCCA ACGAGCTGCC CTGGCGAGAA TCGATCGCCG ACGTGGTGGT GATCGGACAG AACGCCGACG GACACATCGA TATCGACGCC CTCGCCGCGG AGCTCGACCG CTACGCCGAC CGTCCACTGA AGATCGGCTC GTTCTCGGCA GCGAGCAATG TGACCGGCAT CCTCAGCGAT ACCAGCCGCA TCAGCGCCCT ACTGCATGCG CACGGAGCGC TCTCGTTCTG GGACTTCGCG GCCGCCGCCC CGTACGTGAA CATCGAGATG TACCACGGGG ACCCGGAACG GGCGCTATCG ACCGGCGCGT TCAAGGACGC GATCTTCCTC AGTCCGCACA AGTTCGTCGG TGGCCCCGGC ACGCCGGGCG TTCTCGTGGT CCGCCGCGAG CTGCTGAGCA ACCGTGTCCC CGTCGTTCCC GGCGGTGGCA CGGTGACCTA TGTCAATCCC GATGACCATC GCTACGTCGA CGATCCCGCC CAGCGCGAAG AGGCGGGCAC CCCCGCGATC GTCGAATCCA TCCGCGCGGG CTTGGTTTTC GGCCTCAAAC AGGAGGTGGG GGTGGATGTG ATCCACGCCC ACGAGGAGAA CCTGTTGCGG CGGGCCGTGC GGCGCTGGGA GGCGGAACCG GCGATCGAGA TCCTGGGCAA CCTCGACGCC GACCGGCTCT CCATCCTGTC CTTCGTGGTG CGCTCGCCTT CGGGGAAGTT CCTGCATCAC AACTTCGTCG TGGCGCTGCT CAACGATCTG TTCGGGATCC AGTCCCGCGG GGGCTGTTCC TGCGCCGGAC CGTACGGGCA CCGGCTGCTG GGCATCGACC TGGACCATTC CCGCGAGTTC GAGCAGGAGA TCTCGCGAGG CTGCGAGGGC ATCAAGCCCG GCTGGGTGCG CGTGAACTTC AACTACTTCA TCTCCGAGCA GGTCTTCGAC TACCTCGTCG AAGCGGTGCT GATGGTGGCT CGCGAAGGCT GGCGTCTGTT GCCCGACTAC CGGTTCGAAC CCGACTCCGG CCTGTGGCGG CACCGTCGCG GTGCGATCGA GCCACCCGTT CGGCTCACCG ACGTGGGCTA CGACGAAGCG GGCCGGATGA CCTACACCCA GCACGACGAC CGTGCACCGG AGAGCGCGCT CGCGGGCTAT CTGGCCGAGG CGCAGGCGAT CTTCGCGGTA TCCACTCCGG ATATCAGCGC ATCGGCCGCA TTGTCGGCTG ATTTCGATCA CCTGCGCTGG TTCGACCTGC CGACGGTCTG CGTCGACCGG TGA
|
Protein sequence | MAHAGDLPEP PILGRIRDSL IGDDQVFPGP FGPRRVTYAD YTASGRSLTF IEDFIRNEVL PRYANTHTES SGTGLQTTRL REDARRIIRD AVGGDDETVV IFTGSGCTGA IDKMVGVLGL RIPDGLDRQY GLTDRIPAAE RPVVFIGPYE HHSNELPWRE SIADVVVIGQ NADGHIDIDA LAAELDRYAD RPLKIGSFSA ASNVTGILSD TSRISALLHA HGALSFWDFA AAAPYVNIEM YHGDPERALS TGAFKDAIFL SPHKFVGGPG TPGVLVVRRE LLSNRVPVVP GGGTVTYVNP DDHRYVDDPA QREEAGTPAI VESIRAGLVF GLKQEVGVDV IHAHEENLLR RAVRRWEAEP AIEILGNLDA DRLSILSFVV RSPSGKFLHH NFVVALLNDL FGIQSRGGCS CAGPYGHRLL GIDLDHSREF EQEISRGCEG IKPGWVRVNF NYFISEQVFD YLVEAVLMVA REGWRLLPDY RFEPDSGLWR HRRGAIEPPV RLTDVGYDEA GRMTYTQHDD RAPESALAGY LAEAQAIFAV STPDISASAA LSADFDHLRW FDLPTVCVDR
|
| |