Gene Tpau_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3609 
Symbol 
ID9157788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3723433 
End bp3724650 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content70% 
IMG OID 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003648526 
Protein GI296141283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.448364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATCG AGCACCAGGA GCGGACGGAG GCCACGATCC TCCATGCCGA CCTGGACTCG 
TTCTACGCGT CGGTCGAACA GCGCGACCAC CCGTGGTTGC GCCGCCGTCC CGTCCTCGTC
GGTTCCGGGG TGGTGCTTGC CGCGAGCTAC GAAGCGAAGA CCCGCGGCGT GCGCTCACCC
ATGCCGCACC GGGAGGCTCT CGCACTGTGC CCCACCGCCA CGACCATGCC GCCCCGGTTC
GACGCCTACA TGGAGGCCAG CCGATGCGTC TTCGAGATCT TCCGGGACAT CTCACCGCTG
GTCGAAGGCC TGTCGGTCGA CGAAGCCTTC CTCGACGTCG GCGGGCTGCA CCGGATCGAC
GGAACGCCGG CCCAGATCGG ACAGCGACTG CGCGAGCGGG TGCGCCGTGA AGTCGGGCTG
CCGATCACCG TCGGCGTGGC GCGCAGCAAG TTCCTGGCCA AGGTGGCCAG TGCAGTCGGC
AAGCCCGACG GACTGCTGGT GGTGGAGCCC GGCAGCGAAC TGCAATTCCT CCACCCCCTC
CCGGTGCGCC GACTGTGGGG CGTCGGCCCG AAGACGGAGG CGCGGCTACA CGAGGCCGGC
ATCACCACCG TCGGGCAGAT GGCGGCACTG GGCGAGCAGC GGCTCGCGAA ACTGCTCGGC
CGCGGCACCG GCCGACACCT GTTCGCACTG TCCATGGCGC ACGACCCGCG GCGAATCGAC
ACCGGTCGGC GCCGCAAGTC GATCGGCGCG CAGCGTGCCC TGGGCCGCAG GATCACGTCC
GAGAACGAGA TCGAGGGCAC CGCTCTCGCC ATCATCGACC GACTCGGGGA GCGGCTGCGC
GCCGCGGGCC GAGTCACCCG CACGGTGGAA CTGCGGCTGC GGTTCGACGA TTTCACCTCC
ATCACCCGGT CGCGATCACT GCGCGAGCCC ACCGATCACA CCGAGGTCGT GCTGGCCACC
GCGCGGGCGC TCCTCGACGA GGCGATGCCA CTGATCCGGG AGCGTGGATG CACGCTGATC
GGCCTGTCGC TGGCGAACCT GGAGAATCAC GGCGCGGTCC AGCTCACTCT CCCTTTCGAC
GGCGGCGAGC ACGATGCCGA CCTCGACCTC GCGATGGATG CGCTGCGCAC CAGATTCGGC
CGCGCGGCCG TCACGCGCGG CTCGCTGCTG CACCGCCCGT TGGGCCCGGA CGCCCCGATG
CTCACCGAGC AGGACTGA
 
Protein sequence
MHIEHQERTE ATILHADLDS FYASVEQRDH PWLRRRPVLV GSGVVLAASY EAKTRGVRSP 
MPHREALALC PTATTMPPRF DAYMEASRCV FEIFRDISPL VEGLSVDEAF LDVGGLHRID
GTPAQIGQRL RERVRREVGL PITVGVARSK FLAKVASAVG KPDGLLVVEP GSELQFLHPL
PVRRLWGVGP KTEARLHEAG ITTVGQMAAL GEQRLAKLLG RGTGRHLFAL SMAHDPRRID
TGRRRKSIGA QRALGRRITS ENEIEGTALA IIDRLGERLR AAGRVTRTVE LRLRFDDFTS
ITRSRSLREP TDHTEVVLAT ARALLDEAMP LIRERGCTLI GLSLANLENH GAVQLTLPFD
GGEHDADLDL AMDALRTRFG RAAVTRGSLL HRPLGPDAPM LTEQD