Gene Tpau_3518 details

Gene Information

• Locus tag: Tpau_3518
• ID: 9157693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3629801
• End bp: 3630460
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 70%
• Product: transcriptional regulator, GntR family
• Protein accession: YP_003648436
• Protein GI: 296141193

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATACGG AACGACGGCG CGGCCACGCT GCGGCTCGCG CCACCGACGC ACTGCGTTCG 
GCCATCGTCG GTGGCGAACT CCTCCCCGGT GACCGGTTGC GGGAGGAACC GTTGGCCGCG 
GACCTCCAGG TCTCCCGTAA CACCCTGCGC GAGGCGATGC GGATCTTGGC CCACGAGGGC 
CTAATCGTGC ATGAGGCGAA CCGCGGCGCC ACCGTCACCG TTCCCACCGT CGAATCGATT 
CGCGACCTCT ACCGTGTGCG GCGCACCATC GAGGTGTACA CGCTGCGCGA AGCCGATCCC 
GCGCATCCGG CCGCTGACCG CATGCGCGCC GCCGTGGACG CCGCCCTCGC GGCGGCCGCG 
ACGAAGGACT GGCGCGCGGT CGGCACCTGC GACCTGACGT TCCACCGGGC GATCGTCGCC 
CTCGCCGACA GCCCCCGGCT GGATGCGGTG CTGCAGTCAC TGCTCGCCGA GCTTCGCCTC 
GCGTTCGGCG TGGTCGACGA TCCGCAGGCG CTGCACGCGC CCTTCCTGGC CGATAACGAG 
CGAATACTCG ACCTGTTCGC CGCGGGTGCG TCGGATCGCG CCGCCGACGA GTTGGCCGAT 
TACCTGGGGC GCTCCGAGGC CTTCCTGATC GGTGCCCAGA AGGAGCGTTC GCTCAGCTGA 

 

Protein sequence

MDTERRRGHA AARATDALRS AIVGGELLPG DRLREEPLAA DLQVSRNTLR EAMRILAHEG 
LIVHEANRGA TVTVPTVESI RDLYRVRRTI EVYTLREADP AHPAADRMRA AVDAALAAAA 
TKDWRAVGTC DLTFHRAIVA LADSPRLDAV LQSLLAELRL AFGVVDDPQA LHAPFLADNE 
RILDLFAAGA SDRAADELAD YLGRSEAFLI GAQKERSLS