Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3494 |
Symbol | |
ID | 9157669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3606983 |
End bp | 3607609 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003648412 |
Protein GI | 296141169 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCCAT CGGTGCAATC CCCGGATTCA ATACCGCGCC AGGAACAAAT CATCCAGACG GTGATCAGTT TGATCGCCGA ACACGGATAC GCGTACACCT CCTTGCAACG AATCGCGGAT GCGGCATCGA TCTCCAAGGC GACCGTTCTC TACCATTTCT CCAACAAGAA CGAACTGGTG AGCGCGGCCT ATGACACCGT CCTCGCCGAT CTGACCGGTA GCGTCGGGAA AGCCGTCGCG GCCGCGAGTT CGCCCGCGGA TGCGGTGGAG GCGTACGTCA CCTCGATGGT GGGGTACTTC GCAACGAGTC CGGAACGCGC TCGGTTCCTC GTGCGGTGGC TCGAGGTCTC GGATTCGGGG GTAGGGGTGT CGCGCAACAG CGCCGGCCGC TGGGGCCCCT TGGCGGAACT GATCACCCAG GCCCAGAAGA GTGGCCAGTA TTCGCCGTCG ATCGACCCCC GAGCGCACGC AGTCGCCCTC GGGGGCGTCG TGGATGCGCT GATCAATGAA TCGCACGCCG ACCCCACGTT CGCCCTCGAC GCCTGTACGG CAACACTGCT CTTCTTCACG CGCTCGACCG CTGACGGCCG GGCGCTCGAC ACCGATGCGC CGCGTCCGAG CCCGTAG
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Protein sequence | MRPSVQSPDS IPRQEQIIQT VISLIAEHGY AYTSLQRIAD AASISKATVL YHFSNKNELV SAAYDTVLAD LTGSVGKAVA AASSPADAVE AYVTSMVGYF ATSPERARFL VRWLEVSDSG VGVSRNSAGR WGPLAELITQ AQKSGQYSPS IDPRAHAVAL GGVVDALINE SHADPTFALD ACTATLLFFT RSTADGRALD TDAPRPSP
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