Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1737 |
Symbol | |
ID | 9155887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 1808615 |
End bp | 1811977 |
Gene Length | 3363 bp |
Protein Length | 1120 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | lysyl-tRNA synthetase |
Protein accession | YP_003646694 |
Protein GI | 296139451 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAGA GCGTCCGCGA GCGGACCACC GAGGCGACTG CCACCTGGCT GGCCCGGACG ATGTTCTTCG CCGCCATCGT CTCACTGCTG GGCGCGCTGG TCCACGGCGA CCGCATCCTG CCGATCCTCG CCGATGTGCT GGGCGTGCTC GGCATCCCCT CGTTCCCCAG CCTGCTGTTC GTCGCGCTGC TGACGGTGCT TAGCGGGGCG CTGCGCCGGC GGCTCCGGGC CGCGCACACC GTGGCCTGCG CTCTCATGGC CACGGAGGTC GCGGCGAACA TTTTCGTCCT GGTGCTCGTG GTCACCGAGG AGCTCGGCGA CGACGACGGC AGCGCCCGCG TGCCGGCCCT GCTGGCGAAC TACTTCGAGG CCCGCTACTC GTTGCCGGGC GCGGCCTTCG CGGCTGCGGT GAGCGCGGCG ACGCTCGCCC TGGTCATCGC CGCCCGGCCC GCCTTCCCCG CGAAGCTGGC CCACGGGTCC CGCCGCGCGG CGCTCGGCGT CCTGGTGGGC GGGCTACTGC TGTCGTACCT GGTCACGCTG GCGCTCACGT TCACCTTCCC GGGCCGGCTA CGCGGTCCGG TCGAGATCGC GGTGTGGGCG CTGCGCTCGA CCTTCGGCGT CTCACTCCCC CGCCCGCTGG ACCTGCTGCT CAACGGTCAC TCCGGCCCGC AGTGGATCTA CTCCTTCGCC GGCATCATGT CGGCGACGGT GCTGATCCTG GCGCTGATGG CGTTCTGGCG CGCCGGTCGC GGCGACGAGC TGATGACCGA ACCGGAGGAA CTGGAGGTGC GCCGCCTGCT GCTCACCTAC GGCGAGGACG ATTCACTGGG CTACTTCGCC ACCCGGCGCG ATAAGTCGGT GATCGCGGCT CCCGATCGCA GAGCGGTGGT CACCAGCCGG GTGGTGGGCC CGGTGTCGAT GGCGAGCGCC GATCCGATCG GCGACCGCGA GTCGTGGCCC GCCGCCGTGC ACGCCTGGCT GGAGGACTGC CGCCGACACA GCCTGTACCC GGCGGTCCTT GCGGCGAGCA TCGACGGTGC CGCGGTGTAC GAGGCTGCCG GGCTGCGGAC ACTCAACATC GGCGACGAGG CGATCATCCA CGTCGATCGG TTCACGCTCA AGGGGCGCGA GATGCGTGCG GTACGGCAAG CCGTCACCCG CGTGAGCGGC GCCGGGTACA CGCTGCAGGT GCGCCGCCAC GCGGACCTCA CCACCGAGGA GCTGACGCAG GTCGCACAGC TCGCGGAGAA GTGGCGCGGC GAGGAGACCG AGCGCGGCTT CTCCATGGCC CTCAACCGGA TCGGCGACCC GGTGGACGGT CGGTGCGTGC TGGTGACCGC GCACGACGCC GCCGGCGAGG TGCGCGGTCT TTTGAGCTTC GTGCCCTGGG GCACCCGCGG CCTCTCGCTC GATCTGATGC GTCGCGACCG GAACGCGGAG AACGGGCTCA ACGAGTTCAT GGTGGCCAAA CTCGTCGAGG CCAGCGCGGA GATCGGCATC CGTCGCATCT CCTTGAACTT CGCCGTTTTC CGCGCTGTCT TCTTCGAAGC AGACCGGGTG GGCGCGGGGC CCGTCACCCG GATGGTGGAT TCGGTGCTCA GCTTCGCGTC GAAGTTCTAT CAGTTGGAAA CGTTGTATCG GTCGAACGAC AAGTACCGAC CGGACTGGGT GCCTCGGATC CTGTGCTACG ACCCGACGCT CACCGCGGTG CGAGCCGGTA TCGCGGTGGG AACCGCCGAG GGCTTTCTGC CGCAGATCGG GCCGAAGTTC CTCTCCGGCC CCACTGTTCC CGACGAGCAG GATCAGCGCG ACCCAGAATT CGTCGTGCGC CTCCTCGCCG AGGAGGAGCG CCTACTGCAC CGCGAGGCGC CCGCACCACG GCTTTCCGAA CAGCAGCGGG TGCGTCGCCG CAAACTCACG GCGATGGAGG CGGCGGGGAT GCCCGGCTAT CCCCCCTCGG TGCCGCGCAC CGCCTCGCTC GCCGAGGTTC GCGGGCACCT CAATGGCCTG GCCCCCGATT CATCGACGGA CACCGTTGTT TCCGTGACCG GCAGGGTGCG TGGCGTGCGT GACTACGGTG GCGTCACCTT CGTCGATCTT CACGAGGACA GGGCCACCTT GCAGGTGATC GCCGAGCGCG GTCGTACTCC CGACGACGTG CGCGCCTTCT GGCGCGAGTC GATCGACATG GGCGACCTGG TGTCGGTGAC CGGTGAGATG GTCACTTCGC ACACGGGTGA GCTCTCGGTT CTGCTCCAGG ACTGGGCCAT GGCCGGGAAG TGCCTCTCAC CGGTCCCGAA GCCGCGGGTG CGACTCGGCG ACGAGACCAG GGCGCGCAGC CGCTCCCTCG ACCTGATGAC CGATGACGGT GCTGTCGACC TGCTCTACCG CCGCTCGCGG GCGGTCGCGG CAATGCGCGC CGCGTTCACC GATCGCGGCT TCACCGAGGT CGAGACGCCG ATGCTGCAGT CGGTGCACGG CGGCGCGGCG GCACGCCCGT TCACCACGCA CATCAACGCC TACGACATGG ATCTGTACCT CCGGATCGCG CCGGAGCTCT ACCTCAAGCG GCTCGCGGTG GGAGGCATGG GCCGGATCTT CGAGATCAAC CGGAACTTCC GCAACGAGGG CGCCGACGCC ACCCACAACC CGGAGTTCAC CTCGCTCGAG GCCTACGAGG CGTACGGCGA CTACACCACC ATGCGAACAC TGACCCGCGA GGTGATCCTC GGCGCCGCGA TCGCCGTCAA CGGCCGGCCG ATCGCGGTAC GGCCCGACGG TTCCGGTGGA ACACGCGAGG TGGACCTCAC CGCCGAATGG CCGGTGATCA CGGTGCACGA GGCTGTTTCC CGGGCCGTCG GCACGTCGGT GACACCCGAC AGCGAGGTCG AGGAGTTGGA GGCGCTGTGC AAGCAGTGGC ACGTCGCGGC TCCCCGGGGA GCGTCGGCGG GCAAGCTGGT CATGGAACTG TACGAGGGGC TGGTGGAAAA GCAGACCGAG TTCCCCACGT TCTACTGCGA TTTCCCGATC GAGGTCTCGC CACTGGCGCG CAGACACCGC CGCGATCCGC GACTCACGGA ACAATGGGAC CTGGTGGGTT TCGGCGCCGA GCTGGGTACT GCCTACACGG AACTGACCGA TCCGATCGAT CAGCGCGAGC GGCTCACCCA GCAGTCGATG GCCGCGGCCG CCGGTGATCC GGAGGCGATG GAACTCGATG AGTCCTTCCT GGATGCCCTG TCGTACGCCA TGCCACCGAC CGGCGGTCTC GGCATCGGTG TGGACCGGAT CATCATGCTG CTTGCGGGAG TGAACATCCG CGCCACGCTG GCCTTCCCGT TCATCAAACC CCAGGACCGC TGA
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Protein sequence | MQQSVRERTT EATATWLART MFFAAIVSLL GALVHGDRIL PILADVLGVL GIPSFPSLLF VALLTVLSGA LRRRLRAAHT VACALMATEV AANIFVLVLV VTEELGDDDG SARVPALLAN YFEARYSLPG AAFAAAVSAA TLALVIAARP AFPAKLAHGS RRAALGVLVG GLLLSYLVTL ALTFTFPGRL RGPVEIAVWA LRSTFGVSLP RPLDLLLNGH SGPQWIYSFA GIMSATVLIL ALMAFWRAGR GDELMTEPEE LEVRRLLLTY GEDDSLGYFA TRRDKSVIAA PDRRAVVTSR VVGPVSMASA DPIGDRESWP AAVHAWLEDC RRHSLYPAVL AASIDGAAVY EAAGLRTLNI GDEAIIHVDR FTLKGREMRA VRQAVTRVSG AGYTLQVRRH ADLTTEELTQ VAQLAEKWRG EETERGFSMA LNRIGDPVDG RCVLVTAHDA AGEVRGLLSF VPWGTRGLSL DLMRRDRNAE NGLNEFMVAK LVEASAEIGI RRISLNFAVF RAVFFEADRV GAGPVTRMVD SVLSFASKFY QLETLYRSND KYRPDWVPRI LCYDPTLTAV RAGIAVGTAE GFLPQIGPKF LSGPTVPDEQ DQRDPEFVVR LLAEEERLLH REAPAPRLSE QQRVRRRKLT AMEAAGMPGY PPSVPRTASL AEVRGHLNGL APDSSTDTVV SVTGRVRGVR DYGGVTFVDL HEDRATLQVI AERGRTPDDV RAFWRESIDM GDLVSVTGEM VTSHTGELSV LLQDWAMAGK CLSPVPKPRV RLGDETRARS RSLDLMTDDG AVDLLYRRSR AVAAMRAAFT DRGFTEVETP MLQSVHGGAA ARPFTTHINA YDMDLYLRIA PELYLKRLAV GGMGRIFEIN RNFRNEGADA THNPEFTSLE AYEAYGDYTT MRTLTREVIL GAAIAVNGRP IAVRPDGSGG TREVDLTAEW PVITVHEAVS RAVGTSVTPD SEVEELEALC KQWHVAAPRG ASAGKLVMEL YEGLVEKQTE FPTFYCDFPI EVSPLARRHR RDPRLTEQWD LVGFGAELGT AYTELTDPID QRERLTQQSM AAAAGDPEAM ELDESFLDAL SYAMPPTGGL GIGVDRIIML LAGVNIRATL AFPFIKPQDR
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