| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1014 |
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| Symbol | |
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| ID | 9155154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1037745 |
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| End bp | 1042226 |
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| Gene Length | 4482 bp |
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| Protein Length | 1493 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | DEAD/H associated domain protein |
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| Protein accession | YP_003645986 |
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| Protein GI | 296138743 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGATG CCCTCCGGGC GTTCACGCCC GCCACCGCTG AGTGGTTCGA CGAGTCGTTC
GCCGCACCCA CCGCGGCACA GGCACAGGCG TGGGCGTCGA TCGCGAAGGG CCGCAACACC
CTGGTCGTCG CGCCGACCGG TTCCGGCAAG ACGCTCTCGG CGTTCCTCTG GGCGCTGGAC
CGGCTGGCGG AGACGGCACC ACCGGAACGG CCCAGCGGAA CCTCGGTGCT CTACATCTCC
CCACTCAAGG CGCTCGCGGT CGACGTGGAG CGGAACCTGC GCGCACCCCT ATCCGGCATC
GCCCGCGTGC GAGCACGCCG GGGCGAGCCC GCGCCCGAGA TCAGCGTGGG AGTGCGATCG
GGCGACACCC CGGCCCAGCA ACGGCGGAAA CTGATCCGCA CGCCACCCGA CGTGCTGATC
ACCACGCCCG AGTCACTGTT CCTCATGCTC ACCTCACAGG CCCGCGAGAC GCTGGCGGGC
GTGCACACGG TGATCGTCGA CGAGGTGCAC GCGGTCGCGG GCACCAAACG CGGCACGCAC
CTGGCGCTGT CGTTGGAGCG GCTCGACGCA CTGCTGGAAC GGCCCGCGCA ACGGATCGGG
CTCTCGGCCA CCGTGGAGCC CGCGCAGGAG GTGGCGGCCT TCCTCGGCGG CCCGCGCCCG
GCCACCGTGG TGCGGCCACC CTCGGAGAAG GAGTTCGACC TGACCGTCAC CGTCCCGGTG
CCGGACATGA CCGAACTCGA CGTGATCCCG GGCGACGAAG ACGAGCCGGT GCAACAGGGT
TCCCTGTGGC CGCACGTCGA GGCCGCGATC GTCGACCTCA TCGGGCGGCA CCGGTCCACC
ATCGTCTTCG CCAACTCCCG GCGGCTGGCG GAGCGGCTCA CCGCGCGGAT CAATGAGTTG
GCCGCGGGCG TGCACACGGG CGCACCGAAT CCCACCGTGG CCGGGGGTGC TCCCGCGCAG
GTGCTCGCCA GCGGCCAGAG TCATGGGGCG GAGGCTGTGC TCGCACGCGC TCACCACGGT
TCGGTGAGCA AGGAGCAGCG CGCGATCATC GAGGACGATC TGAAATCGGG GCGGCTGCGC
TGCGTGGTGG CCACATCCAG CCTGGAGCTC GGGATCGACA TGGGCGCTGT CGATCTGGTG
ATCCAGGTGG AGGCACCACC ATCGGTGGCG GCCGGCCTGC AGCGCGTCGG TCGCGCAGGG
CACCAGGTGG GCGAGCCCAG CCGCGGCGTC TTCTTTCCCA AGCATCGCAC TGATCTGTTG
CACAGCACCG TCACCGTGCA GCGGATGCGC GAGGGCGCGA TCGAGAAGCT CTCCGTGCCG
CGTAATCCGC TCGACGTGCT GGCGCAACAG ACCGTGGCGG CCGCGGCGAT GGACGTGCTC
GATGTGCACG ACTGGCTCGC GCTGGTACGC CGCGCGCATC CCTATGCGGC ACTCCCGGAT
TCCGCCTACG AGGCGGTTCT CGATCTGCTC TCCGGTCGGT ATCCGTCGGA GGACTTCGGC
GAGCTTCGGC CAAGGCTGGT GTGGGATCGC GACGCCGGCA CACTCACCGG CCGGCCTGGG
GCCGGGCGGC TCGCCGTGAC CTCGGGCGGC GCGATTCCCG ACCGCGGCCT GTTCGGGGTG
TTCATGGTGG GCGAGAAGGC CTCCCGCGTG GGCGAGCTCG ACGAGGAGAT GGTCTACGAG
TCCCGGGTGG GCGATGTCTT CGCCCTGGGC GCTACCTCCT GGCGGATCGA AGAGATCACC
CACGACCGGG TACTGGTCTC CCCCGCCTTC GGCCAGCCGG GCCGGCTGCC CTTCTGGGTG
GGAGACACCG TGGGCCGCCC CGCCGAACTC GGTCGCGCCA TCGGGCGGTT CACCCGCGAA
TTCACCGCGC TCTCCGGCCC CGACCGGTCG GCACAGGCGG GAGCCGTGGG CCTCGGCGAT
TGGGCCACCG ACAACCTCGT CGCCCTGCTC GATGAGCAGG AGCAGGCGAC CGGCGTACTG
CCTACCGACC GCACCCTCGT CGTCGAGCGC TTCCGGGACG AGCTCGGCGA CTGGCGGGTG
GCGCTGCACT CCCCGCTCAG TATGCGGGTG CACGCACCCT GGGGCCTCGC TATCGGAGCA
CGGCTGACCG AGCGGTACGG CATCAGCGGC GCGGTGACCG CCACCGACGA CGGGATCGTG
GTGCGGCTAC CCGATACCGA CGATGCACCG CCCGGCGCTG AGCTGTTCCG GTTCGATCCC
GACGAGATCG ACGGCCTGGT CACCGATGCC GTGGGATCGA GTGCGCTGTT CGCTTCCCGG
TTCCGCGAGT GCGCGGCCCG CGCCTTGCTG TTACCGCGCC GCGATCCGGG CAAGCGGTCA
CCCCTGTGGC AACAGCGGCA ACGCGCCAGC CAGTTGCTGG AGGTGGCACG CAACTACTCG
CAGTTCCCGA TCGTGCTGGA GGCCGTGCGG GAATGTCTGC AGGATGTGTA CGACGTGCCG
GAACTCGTCG CCGTGCATCG CAGTCTGCAG TCTCGGGCGC TGCGGATCGC GGAGGTCGAG
ACGGTGACGC CGTCACCGTT CGCGGCGTCG CTGCTGTTCA GTTACGTGGG GGCGTTCATG
TACGAGGGCG ATGCGCCGCT CGCGGAACGC CGCGCCGCGG TATTGAGCCT GGACCCGGCG
GTGCTCTCGC AGTTGCTCGG CCGCGTCGAG CTCACCGAGC TGCTGGATGC CGACATCCTC
GACGAGGTGG CGGCGCAGCT GCAACGCACC GCATCCGGCT ACCGCGCGCG CACCCTGGAG
CAGGTGGCCG ATCTGATCCG CGAGCTCGGT CCGCTCGGCC GTGCCGAGAT CGCCGACCGG
TCCGAAGGCG TCGATCCGGT GCGCGCGGTC GATGAACTGA TCGACGCGGG AAGAGCGTTC
GGCTATGGCG ACGGCTGGAT CGCCGCCGTG GAAGACGCCG CACGGCTGCG AGACGGCCTC
GGGGTGCCGC TGCAACCCGG CATCGCGCAG GCGTTCACCG AGGCGGTGCC CGATCCGATC
GGCGATCTGG TCGCCCGGTA CGCGCGCCGG CATGGGCCGT TCACCGCTAT CCAGGTGGCC
CGCCGGTACG GACTCGGCGT GGCGGTCGTG CACCGCGCAC TCGCCGACCT GGTCTCCGGC
CGCCGTGTGG TGGAGGGCCG GTTCATCGCG CTGGACGAGA CCGAAGCCGG CGACTCCCCG
CAGTTCTGCG ACGCCGAGGT CCTCCGCCGG ATTCGGCAGC GCAGCCTGGC CCGGCTGCGG
CACGACGTCG AACCCGTTCC CGAGCGGGCC TACGCCGAGT TCCTCGCCGC ATGGCATCAC
CTGCGCGCGC CGCTGCGCGG CGTCGACGGC GTGGCCACGG TGGTCGACCA GCTCGCCGGG
GTGCCGATTC CGGCGTCGGC GTGGGAGACG CTCGTACTGC CGCAGCGGGT ACACGATTAC
ACGCCCGCGA TGCTCGACGA GCTCACCGGC ACCGGCGAGG TGGTGTGGAC CGGGCACGGC
GCGATCGGTG CCCAGGACGG CTGGATCGCC TTCCACCCGG CGGATCTGGC TCCGCTCACG
GTGGCGCCGC CGGATGCGCT GGACCTCACC GATGCGCACG TGGCGATCGA GGACGCGGTG
CGCGGAGGTG GCGCCTACTT CTACCGCCAG CTGGCCGGTG CGACGCCCGA GGCGCTGTGG
GATCTGGTGT GGGCGGGCAG GCTCACCGGC GATACCTTCG CACCGGTGCG GGCCCGATTG
GCGGGCGGAC GTCGTGCGAC GGCGCACCGG TCGCCGCGGC GGCCGCCGCG AGCGCGGTTC
CGGATGCCGG TCGAGCAGTC GCCGCCGATG GTCGGGGGCC GATGGTCGCT GCCGCCGGCA
CCCCCTGAAG CGGACGATCC GACGGTCCGC TCGCACACCC TCGCCGAACA GCTCCTGGAA
CGGTACGGCG TGGTGACCCG CGGCGCCGTG ATGGCCGAAC ATGTCGAGGG CGGATTCGCA
CGGGTGTACC GCACCCTGGC GGCGTTCGAG GAGTCCGGGA AGGCCCGGCG CGGCTATTTC
ATCGAGCGAC TCGGGGCGGC CCAATTCGCG CGGAACGGCA CCGTCGACGC GCTGCGCGAT
GCGGCGACGG CGCTGCAGCG CTCGGACGAG CGGGGCGAGC CCGCGCCACC GCTGGTGCTC
GCGGCCACCG ATCCGGCGAA CCCCTTCGGT GCCGCGCTGC CCTGGCCGGA ACGATCGCCG
TCGGGTGATA CCCCCGGGGC CAGGCCGGGC CGCAAGCCCG GCGCCGTCGT CGTGCTCGCC
GACGGCGCAC TCGCCGCCTT CGTCGAGCGC GGAGGCCGCA CCCTGCTCAC CTTCACCGAT
GCCCCGGAGG CGGCGTTCGC GGCGCTCGCG GAGGCGGCGC CGCGGCTCGG CGGCCTCACC
ATCGACAAGA TCGACGGTGC ACCGGCGCTC ACCTCCCCGC TGGCCGGCGC ACTCGCCGCC
GCCGGTTTCG CAAAGACTCC GAAGGGACTG CGGGTGCGCT GA
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| Protein sequence | MPDALRAFTP ATAEWFDESF AAPTAAQAQA WASIAKGRNT LVVAPTGSGK TLSAFLWALD
RLAETAPPER PSGTSVLYIS PLKALAVDVE RNLRAPLSGI ARVRARRGEP APEISVGVRS
GDTPAQQRRK LIRTPPDVLI TTPESLFLML TSQARETLAG VHTVIVDEVH AVAGTKRGTH
LALSLERLDA LLERPAQRIG LSATVEPAQE VAAFLGGPRP ATVVRPPSEK EFDLTVTVPV
PDMTELDVIP GDEDEPVQQG SLWPHVEAAI VDLIGRHRST IVFANSRRLA ERLTARINEL
AAGVHTGAPN PTVAGGAPAQ VLASGQSHGA EAVLARAHHG SVSKEQRAII EDDLKSGRLR
CVVATSSLEL GIDMGAVDLV IQVEAPPSVA AGLQRVGRAG HQVGEPSRGV FFPKHRTDLL
HSTVTVQRMR EGAIEKLSVP RNPLDVLAQQ TVAAAAMDVL DVHDWLALVR RAHPYAALPD
SAYEAVLDLL SGRYPSEDFG ELRPRLVWDR DAGTLTGRPG AGRLAVTSGG AIPDRGLFGV
FMVGEKASRV GELDEEMVYE SRVGDVFALG ATSWRIEEIT HDRVLVSPAF GQPGRLPFWV
GDTVGRPAEL GRAIGRFTRE FTALSGPDRS AQAGAVGLGD WATDNLVALL DEQEQATGVL
PTDRTLVVER FRDELGDWRV ALHSPLSMRV HAPWGLAIGA RLTERYGISG AVTATDDGIV
VRLPDTDDAP PGAELFRFDP DEIDGLVTDA VGSSALFASR FRECAARALL LPRRDPGKRS
PLWQQRQRAS QLLEVARNYS QFPIVLEAVR ECLQDVYDVP ELVAVHRSLQ SRALRIAEVE
TVTPSPFAAS LLFSYVGAFM YEGDAPLAER RAAVLSLDPA VLSQLLGRVE LTELLDADIL
DEVAAQLQRT ASGYRARTLE QVADLIRELG PLGRAEIADR SEGVDPVRAV DELIDAGRAF
GYGDGWIAAV EDAARLRDGL GVPLQPGIAQ AFTEAVPDPI GDLVARYARR HGPFTAIQVA
RRYGLGVAVV HRALADLVSG RRVVEGRFIA LDETEAGDSP QFCDAEVLRR IRQRSLARLR
HDVEPVPERA YAEFLAAWHH LRAPLRGVDG VATVVDQLAG VPIPASAWET LVLPQRVHDY
TPAMLDELTG TGEVVWTGHG AIGAQDGWIA FHPADLAPLT VAPPDALDLT DAHVAIEDAV
RGGGAYFYRQ LAGATPEALW DLVWAGRLTG DTFAPVRARL AGGRRATAHR SPRRPPRARF
RMPVEQSPPM VGGRWSLPPA PPEADDPTVR SHTLAEQLLE RYGVVTRGAV MAEHVEGGFA
RVYRTLAAFE ESGKARRGYF IERLGAAQFA RNGTVDALRD AATALQRSDE RGEPAPPLVL
AATDPANPFG AALPWPERSP SGDTPGARPG RKPGAVVVLA DGALAAFVER GGRTLLTFTD
APEAAFAALA EAAPRLGGLT IDKIDGAPAL TSPLAGALAA AGFAKTPKGL RVR
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